Pantoea sp. SOD02: NR302_10655
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Entry
NR302_10655 CDS
T10895
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
panz Pantoea sp. SOD02
Pathway
panz00061
Fatty acid biosynthesis
panz00071
Fatty acid degradation
panz01100
Metabolic pathways
panz01212
Fatty acid metabolism
panz02024
Quorum sensing
panz04146
Peroxisome
Module
panz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NR302_10655 (fadD)
00071 Fatty acid degradation
NR302_10655 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NR302_10655 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
NR302_10655 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
panz01004
]
NR302_10655 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
panz04147
]
NR302_10655 (fadD)
Enzymes [BR:
panz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NR302_10655 (fadD)
Lipid biosynthesis proteins [BR:
panz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NR302_10655 (fadD)
Exosome [BR:
panz04147
]
Exosomal proteins
Exosomal proteins of breast milk
NR302_10655 (fadD)
Exosomal proteins of breast cancer cells
NR302_10655 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF4235
Motif
Other DBs
NCBI-ProteinID:
UVC27739
LinkDB
All DBs
Position
complement(2285899..2287575)
Genome browser
AA seq
558 aa
AA seq
DB search
MNKVWLKRYPADVPAEINADRYASLVDLFEHAAEQYADQVAFINMGQPMTYRQLEKQSRA
FAAWLQQGLGLKQGDRVALMMPNLLQYPVALFGVLRAGMVVVNVNPLYTPRELKHQLVDS
GASAIVIVSNFAHTLEKVVAETPIKHVMLTRMGDQLAPVKATLVNFVVKYVKKLVPKYHL
PGAVPFRSALSQGEQMTYQRPTVTNDDLAFLQYTGGTTGVAKGAMLTHRNMQANLEQTKA
TYGKLLRPGKEQVVTALPLYHIFALTVNGLLFLDLGGTNLLITNPRDIPGFVKELSKFPF
TAITGVNTLFNALLNDANFNKLDFSTLRLSAGGGMAVQKAVAERWEKLTGHYLLEGYGLT
ECSPLVSVNPYDITCHTGSIGLPVPSTDVRIVDDEDKDVAPGEPGELCIRGPQVMTGYWQ
RADATDEVLKNGWLHTGDIVTVDSEGFIRIVDRKKDMILVSGFNVYPNEIEDVLMQHEKV
REAAAIGVPSDLSGEAVKVCIVKKDPSLTKEEVLDHCRRQLTGYKVPKIIEFRDELPKTN
VGKILRRELRDEAKREGQ
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaggtttggctcaaacgctatccggcagatgtccctgcggaaattaatgcggat
cgttacgcttcattggtcgatcttttcgagcacgcagcagagcaatacgccgatcaggtg
gctttcattaatatgggccagccaatgacctatcggcagctggaaaagcagagccgcgcc
tttgccgcctggctgcagcaaggtttaggtttgaagcagggcgatcgcgtggcgctgatg
atgccaaacctgctgcaatatcccgtcgcgctgtttggcgtattgcgcgctggcatggtg
gtggtgaacgtcaatccgctttacacgccacgggaactcaagcatcagctagttgatagc
ggtgccagcgccattgtcatcgtctcgaactttgcccacacgctggaaaaagtggtggcc
gaaacgccgatcaaacatgtgatgctaacgcgtatgggcgatcagctggcgccggtgaaa
gccacgctggtgaacttcgtcgttaaatacgtgaaaaagctggtgccgaaataccacctg
ccgggcgcggtgccgttccgcagcgccttgtcgcagggcgaacagatgacctatcaacgc
ccaaccgtgaccaatgacgatctcgccttcctgcaatacaccggcggcaccaccggcgtg
gccaaaggcgcgatgctaacgcaccgcaatatgcaggccaatctggaacagaccaaagct
acttacggcaaactgctgcgtcccggcaaagagcaagtggtgaccgcgctgccgctctac
cacatttttgcgctgacggtgaacgggctgctgttcctcgatcttggcggcacaaacctg
ctgattaccaatccacgcgatattcccggctttgtcaaagagctcagcaagttcccgttt
accgccatcaccggcgtgaacaccttgttcaatgcactgctgaatgatgccaattttaat
aagctcgatttctccacgctgcgcctgtctgcaggaggcggcatggctgtgcaaaaagcg
gtcgccgagcgctgggaaaaacttaccggacactatctgctggaaggttacggcctgacc
gagtgttcgccgctggtgtcagtgaatccgtatgacatcacctgtcacactggcagcatt
ggtttgccggtgccgtccaccgatgtgcgcatcgtcgatgatgaagacaaagatgtcgcg
ccaggcgaaccgggcgagctgtgtattcgcggcccgcaggtgatgactggctactggcag
cgcgctgatgcgaccgatgaagtgctgaaaaatggctggctgcataccggtgatattgtt
accgttgatagtgaaggctttattcgcatcgtcgatcgtaagaaagacatgattctggtg
tcaggctttaacgtgtatcctaacgagatcgaagatgtgctgatgcagcacgagaaagtg
cgtgaagctgcggcgattggtgttcccagcgatctgtcgggcgaagcggttaaagtgtgc
atcgtgaagaaagatccctcactgaccaaagaagaggtgctggatcactgccgtcgccag
ctcaccggctacaaagtaccgaagattatcgagtttcgtgacgagttgccaaagaccaat
gtaggcaaaattctgcgtcgcgaattgcgtgatgaggcgaagcgagaagggcagtaa
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