Pantoea sp. SOD02: NR302_11040
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Entry
NR302_11040 CDS
T10895
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
panz Pantoea sp. SOD02
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
panz03000
]
NR302_11040
Transcription factors [BR:
panz03000
]
Prokaryotic type
Helix-turn-helix
LysR family
NR302_11040
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Ortholog
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_24
TP6A_N
HTH_5
Motif
Other DBs
NCBI-ProteinID:
UVC27812
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Position
complement(2361268..2362494)
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AA seq
408 aa
AA seq
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MAEKDMQELTNLMQIRAFSQVVAQGSVSRAADELFRTQSAITRAIRDLELTLGVTLFERH
AGGMMLTDFGKCVLPRALRAIEELHQVPQRLAKLQGRGAQRSDAEPLWLFNVRRLQIFIT
LCQTRHMQTVAARLGLSQPAVSAALRVLENGAGIALLERTPHGMMPSLAGREIEANVRRA
LNELRHIPADIAARSGILEGTVRVGALPLGRTRILPQAIVMLTARYPGVRVVTSESAFGV
LASEMRSGDIDFIFGALRRDEDALDVTRETLFSERMVLLARHDHPLLGRELSTEDLRAAR
WVLPRSATPARYLLNNSFQAMGIPAPDPVVETGDLALVRGLLMQSDMLAAVSAHQLEVEL
ASGALVALPVPLPDTDRAIGLTVRAGCLHSPAADALIRCLREVCGQDE
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaaggacatgcaagagctgacaaaccttatgcaaatcagggcatttagtcag
gtggtggcacaaggcagtgtctcgcgggcggcagatgaattatttcgcacccagtcggcc
attacccgtgccattcgcgacctggagctcaccttaggcgtgacgctgtttgaacgtcat
gccggtggcatgatgctgactgacttcggtaaatgcgtgctgccgcgcgcgttgcgggcg
attgaggagttgcatcaggtgccgcagcgtctggcaaaattgcagggacgcggcgcacag
cgtagcgatgctgaaccgctgtggctatttaacgtacgtcggctgcaaatttttatcacc
ctgtgtcagacgcggcatatgcagacggtggcggcacggctcgggctgagccagccagcg
gtgagcgccgcgctgcgcgtactggaaaatggcgcgggcatcgcgctgctggagcgcacg
ccgcacggcatgatgccttcgctggccgggcgtgaaattgaagccaacgtgcgacgtgcg
ctgaatgaactgcgccacattccagctgatattgctgcccgcagcgggatacttgaggga
acggtgcgcgtgggcgcattgccgctgggacgcacgcgtatcctgccacaggcgatcgtg
atgctgacggcgcgttatccgggcgtgcgcgtggtaaccagtgaaagcgcctttggcgtg
ctggcttcggaaatgcgctctggcgatatcgattttatctttggcgcgctgcgccgcgat
gaagatgcgctggacgtcacgcgcgagacgctgttctcggaacgcatggtgctgctggcg
cgtcacgatcatccgctattaggacgtgagctttctaccgaagatctgcgcgctgcgcgt
tgggtgctgccgcgttcggccacgccagcgcgatatctgctgaataacagtttccaggcg
atggggattccggcgcccgatccggtggtggaaaccggcgatttggcgttggtgcgcggc
ttgctgatgcagtcggatatgctggcggcggtctccgcgcaccagctggaagtggaactg
gcgtccggtgcgttggtggcgctgccggtgccattaccggataccgatcgcgccatcgga
ctgacggtgcgggcgggctgtctgcactcaccggcagcggatgcgctgatccgctgcctg
cgagaagtgtgcgggcaggatgaataa
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