KEGG   Pantoea sp. SOD02: NR302_11110
Entry
NR302_11110       CDS       T10895                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
panz  Pantoea sp. SOD02
Pathway
panz03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:panz00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NR302_11110 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:panz02044]
    NR302_11110 (tssM)
Secretion system [BR:panz02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NR302_11110 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related SpGH101_helical
Other DBs
NCBI-ProteinID: UVC31323
LinkDB
Position
2376400..2378514
AA seq 704 aa
MRASLQHLLTHRLLWSLIGVTALSCVLWMLGPLWSWGDTRPLEPVLPRQLAVGLLYLLWL
LFQFIPALWRGWFNSKLLNRLQQMSQEELSDRQATETLLAQRFSEAALRLKRTQFGRRHQ
QSWLARFQSHYLYQLPWYVMIGAPGAGKTTALLNAGLEFPLTDSLGKAAIRGVGGTRHCD
WWFTDSAVLIDTAGRYALQESQRARDGAEWQSFINLLKRYRTRQPINGVIMTISVSDLLT
DSAEARHAQASALRERMAELHQHTGIHFPVYVMVTKTDLLKGFMSFYGSQSKPQRDAIWG
FTFPWEPGKPHKDDWHRSFSQQYQHLEQRLQQQLAEVMASERDLTQRADSFLFPQEFSSL
RPLLNEYLDVVFSSHQEPIAWSARGLFFTSGTQEGLPFDRIMGELNRKLQLPHTGESSLA
AWDSVNRSSPIPGNKGQSFFIRDLLSDLVFRESGLAGSNRHWEYRNRLFHWIGYGVLTGA
LLLLSCLWLTSYIQNQRYLDQVAERIGPITTQSQQVIHQPADNIFDLLPFLNNLVKLPLS
ERFSLDNPPLTMRVGLYRGNQVSDAAWALYQNALKSLLLPRVAQQITNLLRDDPGTDNEY
SRNALRAYQMLYQPRNYDGEFLRGWLMQNLQRTLPDDVSARDLQQLDWHLSQLLDQQIQS
SPYARDNALMMRKLAENLKNAGDSSNTLAIAPHVVSQRLTRHSE
NT seq 2115 nt   +upstreamnt  +downstreamnt
atgcgcgcatcactgcaacatctgttaacccatcgcctgctgtggagcctgattggcgtc
acggcattgagctgcgtgctgtggatgctcggaccgctgtggagctggggcgatacgcgc
ccgctcgagccggtattgccgcgccagttagcggtcggtctgctctatctgctttggctg
ctgttccagtttatcccggcattgtggcgcggctggtttaacagcaagctgcttaaccgt
ctgcagcagatgagccaggaagagttatccgatcgtcaggccaccgaaactctgctggcg
cagcgcttcagtgaagcggcgctgcgtttaaagcgcactcagtttggtcgtcgccatcag
cagagctggctagcacgttttcaaagtcattacctttatcagctgccgtggtacgtgatg
attggcgcgccgggcgccggtaaaaccaccgcgttgcttaatgccggtcttgaattcccg
ctcaccgacagcctcggcaaagcggcgattcgcggcgtgggcggcacgcgccattgcgac
tggtggtttaccgacagcgcagtactgatcgataccgctgggcgttacgccctgcaggag
agccagcgcgcgcgcgacggcgcggagtggcagagttttattaacctgctgaagcgctat
cgcacccgccagccgattaacggcgtgatcatgaccatcagcgtctccgatctgctgacc
gattcagccgaagcgcgtcatgcgcaggccagcgcgctgcgtgagcgcatggcggagctg
catcagcacaccggcattcacttcccggtttacgtgatggtgaccaaaaccgacctgctc
aaagggtttatgagtttctacggcagccaaagcaagccgcagcgtgatgcaatttggggc
tttacctttccgtgggaaccgggcaaaccgcacaaagatgactggcatcgtagcttcagc
cagcaatatcagcacttagagcagcgtttacagcagcaattggctgaggtgatggcgagt
gaacgcgatctcacccagcgcgccgacagcttcctgttcccgcaagagttcagttcgctg
cgtccgctgctgaatgagtatcttgatgtggtgttctccagtcatcaggagccgattgcc
tggtcggcgcgcggtctgttcttcaccagcggcacgcaggaaggtttaccgtttgaccgc
atcatgggcgagctcaatcgtaaactgcagctaccgcacaccggtgaaagcagcctcgcg
gcctgggatagcgttaatcgcagcagccccattccgggcaacaaagggcagagtttcttt
atccgcgatttgctgagcgatttggtgttccgcgaaagtggcctggcgggtagcaatcgc
cattgggaataccgcaaccgcctgttccactggatcggttatggcgtgctgaccggcgcg
ctgttgctgctctcctgcttgtggctcaccagctatattcagaatcagcgttatctcgac
caggttgcagagcgcattggtccgatcaccacgcaaagtcagcaggtaatccatcagccc
gccgataatatttttgatctgctacccttcttaaataacctggtgaaactgccgctctcc
gagcgtttttccctcgacaatccaccgcttaccatgcgcgttgggctgtatcgcggcaac
caggtaagcgatgcggcgtgggcgctttatcaaaatgcgcttaagtctttactgttgccg
cgcgtggcacagcagatcactaatttgctgcgtgacgatccgggtaccgataacgaatac
agtcgcaatgcgctgcgcgcttatcaaatgctgtatcagccgcgcaattatgacggcgag
tttctgcgtggctggctgatgcaaaacctgcagcgtacgctaccggatgatgttagcgcg
cgtgatttgcagcagctcgactggcatctgagccagctgctggatcaacaaattcagtct
tcgccctatgcgcgtgacaacgcgttgatgatgcgcaagcttgcggagaatctgaaaaat
gccggtgacagcagcaacacgctggcgattgcgccgcacgtcgtttcgcagcgattgacc
agacacagtgagtaa

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