Pantoea sp. SOD02: NR302_11150
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Entry
NR302_11150 CDS
T10895
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
panz Pantoea sp. SOD02
Pathway
panz00541
Biosynthesis of various nucleotide sugars
panz01100
Metabolic pathways
panz01250
Biosynthesis of nucleotide sugars
Module
panz_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NR302_11150 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
panz01005
]
NR302_11150 (kdsA)
Enzymes [BR:
panz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
NR302_11150 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
panz01005
]
Lipid A
NR302_11150 (kdsA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
POLQ_helical
Motif
Other DBs
NCBI-ProteinID:
UVC27833
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Position
complement(2386017..2386871)
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AA seq
284 aa
AA seq
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MTQKVVKIGDIKVANDLPFVLFGGMNVLESRDLAMRICEHYVKVTDKLGIPYVFKASFDK
ANRSSIKSYRGPGLEEGMKIFQELKQAFGVKIITDVHEASQAQPVADVVDVIQLPAFLAR
QTDLVEAMAKTGAVINVKKPQFVSPGQMGNIYDKFVEGGNDQVILCDRGSNFGYDNLVVD
MLGFNVMKNVTQNSPVIFDVTHALQTRDPFGAASGGRRAQVAELARAGMAVGIAGLFIEA
HPEPNSAKCDGPSALPLDKLEPFLVQMKAIDDLVKSFPELDTSN
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgacacagaaagtagtgaaaatcggcgatatcaaggtcgcaaacgatctgccattcgtt
ctcttcggcggcatgaacgtgctggaatcgcgcgatctcgccatgcgcatctgcgaacac
tacgttaaggttaccgacaaactcggcatcccttacgtattcaaagcctcttttgataaa
gccaaccgttcttcaatcaaatcctatcgtggtccaggcctggaagagggcatgaagatt
ttccaggagctgaagcaggctttcggcgtgaaaatcatcaccgacgtgcatgaagcatcg
caggcgcagccggtggctgacgtggttgatgtgattcagctgcctgccttcctcgcgcgt
cagaccgatttagtggaagcgatggcgaaaaccggcgcggtcattaacgtgaagaagcca
cagtttgtaagcccaggtcagatgggcaacatctatgacaagttcgttgaaggcggtaac
gatcaggttatcctgtgcgatcgcggcagcaacttcggctatgacaacctggttgtcgat
atgctcggcttcaacgtgatgaagaacgtcacgcaaaatagcccagtgatcttcgacgtt
acccacgcgctgcaaacgcgcgatccgttcggcgctgcctctggcggccgtcgtgcgcag
gtggctgagctggcgcgtgccggtatggcggttggcattgctggcttgttcatcgaagca
cacccagaaccaaacagcgctaaatgcgacggtccatccgcactgccgctggataagctg
gagccattcctggtgcagatgaaagcgatcgacgatctggtgaagagcttcccagagctg
gataccagcaactga
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