Pantoea sp. SOD02: NR302_12395
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Entry
NR302_12395 CDS
T10895
Symbol
mdtC
Name
(GenBank) multidrug efflux RND transporter permease subunit MdtC
KO
K07789
multidrug efflux pump
Organism
panz Pantoea sp. SOD02
Pathway
panz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NR302_12395 (mdtC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
panz02000
]
NR302_12395 (mdtC)
Transporters [BR:
panz02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NR302_12395 (mdtC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UVC28064
LinkDB
All DBs
Position
2660169..2663237
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AA seq
1022 aa
AA seq
DB search
MKFFALFIHRPVATTLLTLAIALAGILGFRLLPVAPLPQLDFPVILISASLPGASPETMA
ASVATPLERSLGRIAGVSEMTSTSSLGSTRIILVFDFDRDINGAARDVQAAINAAQSLLP
TGMPSRPSYRKANPSDAPIMILTLTSDIYNPGQLYDYASTQLAQKLSQIEGVGDVTVGGS
SLPAVRVELNPQALFNQGVSLDAVRTAISNANQRRPQGAIDDVQQRWQLRTNGELQTASE
YQPLVVHYNNGAAVRLSDVANVQDSVQDVRNAGMTNGKAAVLLVVRKSPEANIIDTVDRI
RGELPELHDVIPAAIDLQIAQDRSPTIRASLHEVEQSLIIAVALVILVVFAFLRDWRATL
IPAAAVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENIARHVEAGMKP
LQAALTGVREVGFTVLSMSLSLIAVFLPLLMIGGIIGRFFSEFAITLSVAILISLFISVT
LTPMMCAYLLKPQVKRSQPRTRGFGKLLMKVQNGYARSLGWVLNHAIWVLMLLLGTVALT
VWLFISIPKTFMPEQDTGRLQGFISADQSISFQAMRGKLQDFMNIIKADPAVDNVTGFTG
GSRTNSGSMFVSLKPLSERSESAQQVIARLRIKLAKEPGANLYLNAVQDIRIGGRESNAS
YQYSLLSDNLNDLREWEPKIRQAFAALPELADVNSDQQDNGSEMNLTYDRESMARLGIDV
SAANALLNNAFGQRQISTIYQPLNQYKVVMEVDPRYTQDISSLDQMFVINSDGKAIPLSW
FAKWQPANAPLSVNHEGLSAASTISFNLPEGVSLSQASEAIDRTITALGVPSSVRGSFAG
TAQVFQQSQSNQLYLMLAAIAAVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNT
PFSLIALIGILLLIGIVKKNAIMMVDFALDAERNGNLSPRDAIFQACQLRFRPILMTTLA
ALFGALPLVLTSGDGAELRQPLGITIAGGLVMSQLLTLYTTPVVYLMMDKLRRRKKKVLV
AG
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
gtgaagttcttcgcgctgtttatccatcgcccggtcgccaccactttgctgacgctggcg
attgcgctggccggtattctcggcttccgcctgctgccggtagcgccgctgccgcagctg
gatttcccggtgattttgatctcggcttcgctgcccggcgcatcgccggaaaccatggcg
gcctcggtggcgacgccgctcgagcgctcgctggggcgcattgccggcgtcagtgaaatg
acctccaccagctcgctgggcagcacgcgcattattctggtgttcgattttgatcgcgac
atcaacggcgcggcgcgcgatgtgcaggcggcgatcaacgccgcgcaaagcctgctgcca
accggcatgccgagccgtccaagctatcgcaaagccaacccttctgatgcgccgatcatg
attttgacgctgacctcggacatttataatcccggtcagctgtatgattacgcctcaacg
cagttggcgcagaagctgtcgcaaattgaaggcgtaggcgatgtgacggttggcggcagt
tcgttgccagcggtacgcgtcgaactcaatccgcaggctttattcaatcaaggcgtgtcg
ctggatgcggtgcgcaccgccatcagcaacgccaaccagcgccgtccgcagggcgcgatt
gatgatgtgcagcagcgctggcagttacgcaccaacggagaattacaaactgccagcgag
tatcagccgctggtggtgcattacaacaacggtgcggcggtgcgcctcagcgatgtcgct
aacgtgcaggattcagtgcaggacgtacgcaacgccgggatgaccaacggcaaagcggcg
gtgctgctggtggtgcgtaaatcgccggaagccaacatcatcgataccgttgatcgcatt
cgtggcgaattgccggaactgcatgatgtgatccccgccgccatcgatctgcaaattgcg
caggaccgctcgccgaccattcgcgcctcgctgcatgaagtggagcagtcgctgatcatc
gccgtggcgctggtgattctggtggtgtttgccttcctgcgcgactggcgcgcgacgttg
atccccgccgctgcggtgccggtttcgctgattggcaccttcgccgccatgtatttgtgc
ggctttagcctgaataacctgtcgctgatggcgttgaccatcgctaccggttttgtcgtc
gatgacgcgattgtggtgctggagaacattgcgcgccacgtcgaagcaggcatgaaaccg
ttgcaggcggcgctgaccggcgtgcgcgaggtcggttttaccgtgctgtcgatgagcctg
tcgctgattgcggtgttcctgccgctgctgatgattggcggcatcattggccgcttcttc
tcggagtttgccatcacgctgtcggtggcgattctgatctcgctgtttatctcggtcacg
ctgacgccaatgatgtgcgcttatctgctcaagccgcaggtcaagcgcagccagccacgc
acgcgcggtttcggcaagctgctgatgaaggtgcagaacggctacgcgcgttcattgggt
tgggtgctgaatcacgctatttgggtgctgatgctgctgctcggcaccgtggcgcttacc
gtttggctgttcatctcgatcccgaaaacctttatgccagagcaggatactggccgctta
caagggtttatctcggcggaccagagcatttcgttccaggcgatgcgcggcaagctgcag
gatttcatgaacatcatcaaagccgatccggcggtagataacgttaccggctttaccggt
ggttcgcgcaccaacagcggctcgatgttcgtctcgctcaaaccgctctccgagcgcagc
gaaagcgcgcagcaagtgatcgcccggctgcgtatcaagctggcgaaagagcccggcgcg
aatctctatctcaacgcggtgcaggacattcgcattggcggacgtgaatccaacgccagc
tatcaatacagcttgttgtcagacaacctgaatgatttgcgcgaatgggagccgaaaatc
cgtcaggcgtttgccgccctgcccgagctggcggacgtcaactcggatcagcaggacaac
ggcagcgaaatgaatctgacctacgatcgtgaaagcatggcgcggctcggcatcgatgtg
tctgccgccaacgcgctgctgaataacgcctttggtcagcgccagatctccaccatttat
cagcctcttaaccagtacaaagtggtgatggaagtcgatccgcgttacacccaggacatc
agttcactcgatcagatgtttgtgattaacagcgacggcaaagcgattccgctgagctgg
tttgccaagtggcaaccggccaacgcgccgctgtcggtgaaccatgaaggcttgtcggcg
gcgtccaccatttcgttcaacctgccggaaggcgtgtcgctatcgcaggcgtctgaagcc
atcgatcgcaccatcaccgcgcttggcgtgccctccagcgtgcgcggcagttttgccggc
accgcgcaggtgttccagcagtcgcaatccaaccagctttacctgatgctggcggcgatt
gcggcggtgtatatcgtgctgggcattctgtatgagagctacgtgcatccgctgaccatt
ctctccacgctgccgtcggcgggcgtcggcgcgctgctggcgctggagctgttcaacacg
ccgttcagcctgattgcgttgatcggcattctgctgctgatcggtatcgtgaagaaaaac
gccatcatgatggtcgactttgcgctggatgccgagcgcaacggcaatctgtcgccgcgc
gacgcgatcttccaggcgtgccagctgcgcttccgcccgattctgatgaccacgctcgcc
gcgctgtttggcgcgctgccgctggtgctgaccagcggtgacggcgcggagctgcgtcag
ccgctcggcatcaccatcgccgggggtttggtaatgagtcagctgctgacgctctacacc
acgccggtggtttatttgatgatggataagctgcggcggcgtaagaaaaaggtattggtg
gcgggttaa
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