Pantoea sp. SOD02: NR302_12910
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Entry
NR302_12910 CDS
T10895
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
panz Pantoea sp. SOD02
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
panz03032
]
NR302_12910 (gyrA)
03400 DNA repair and recombination proteins [BR:
panz03400
]
NR302_12910 (gyrA)
Enzymes [BR:
panz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NR302_12910 (gyrA)
DNA replication proteins [BR:
panz03032
]
Prokaryotic type
DNA Topoisomerases
NR302_12910 (gyrA)
DNA repair and recombination proteins [BR:
panz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NR302_12910 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
UVC28161
LinkDB
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Position
complement(2781072..2783711)
Genome browser
AA seq
879 aa
AA seq
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MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYESIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMAKISSELLADLEKETVDFVPNYDGTEQIPEVLPTKIPNLLVNGSSGIAVGMAT
NIPPHNLTEVINGCLAFIEDEDITVEGLMEHITGPDFPTAAFINGRRGIEEAYRTGRGKI
YIRARGEVETDAKTGRETIIVHELPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG
MRVVIEIKRDAVGEVVLNNLYSLTQLQVSFGINMVALHQGQPKIMTLKGIIEAFVRHRRE
VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAPTPAEAKLGLLAQSWDLGNV
AAMLERAGNDAARPEWLEAEFGIRDGQYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLDQIAELLHILQSAERLMEVIREELELMRDQFGDARRTEITANSADINIEDLINQEDVV
VTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEANERITAILPVREYTEGFNIFMATASGTVKKTAL
QEFSRPRSAGIIAINLREDDELIGVALTNGSDEAMLFSAAGKVVRFAETAVRAMGRSASG
VRGIKLAESDKVVSLIVPREEGAILTVTQNGYGKRTANTEYPTKSRATQGVISIKVTDRN
GPVIGAVQVVDGDQIMMITDAGTLVRTRVSEVSVVGRNTQGVILIRTAEDENVVGLQRVA
EPVEEEELDAIDGSVAEGEDDIAPEVDSDDEAPEADDEE
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgcgagagaaattacaccggtcaatatcgaagaagagttaaaaaactcc
tacctcgattacgccatgtcggtcattgttggccgagccttacccgatgtgcgtgatggt
ctgaagccggtacaccgccgtgtgctttttgccatgagcgaactgggcaacgactggaat
aaaccctataaaaaatccgcccgtgtggtcggtgacgtcatcggtaaatatcacccgcac
ggcgattccgcggtatacgaaagtatcgtgcgtatggcccagccattctccctgcgctac
atgctggttgacggtcagggtaactttggttcggtcgacggcgactccgccgcagcgatg
cgttataccgaagtgcgcatggcaaagatctcttcggagctgctggctgacctggaaaag
gaaaccgtcgatttcgtgccgaactatgacggcaccgagcagatccctgaagtcctgcca
accaaaattcctaacctgctggtaaacggttcttccggtatcgcggtaggtatggcaacc
aacattccaccgcacaacctcacggaagtgatcaacggctgtctggccttcatcgaagat
gaagacatcaccgttgaaggtttgatggagcacatcaccgggccagatttcccgaccgct
gcgttcatcaatggtcgtcgcggtatcgaagaagcctatcgcaccgggcgcggtaagatt
tatatccgcgcacgtggcgaagtggaaaccgatgccaagaccggccgtgaaaccatcatc
gtgcacgaactgccgtatcaggtgaacaaagcgcgcctgatcgagaagatcgccgagctg
gtgaaagaaaagcgcgtagaaggcatcagcgcgctgcgtgacgaatctgataaagacggc
atgcgtgttgtcattgagatcaaacgcgatgcggtcggtgaagtggttctcaacaacctc
tactcgctgacccagctgcaggtctctttcggcatcaacatggtggcgctgcatcagggc
cagccgaagatcatgacgctgaaaggcatcatcgaagccttcgttcgtcaccgtcgtgaa
gtggttacgcgtcgtaccattttcgaactgcgtaaagcgcgcgatcgtgctcacatcctt
gaaggcctggcgattgcgctggcgaacatcgatccgatcatcgaactgattcgtcgtgca
ccaacgccagccgaagcgaaactgggcctgttggcacagtcgtgggatctgggtaacgtt
gccgcgatgctggaacgtgccggtaacgatgccgcgcgtccagagtggctggaagccgag
tttggtattcgcgatggtcaatattatctgaccgaacagcaagcgcaggcgattctggat
ctgcgtctgcagaaactgaccggccttgagcacgaaaaactgctcgacgaatacaaagag
ctgctggatcagatcgctgagctgctgcacatcctgcagagcgctgagcgcctgatggaa
gtgatccgtgaagagctggagctgatgcgcgatcagttcggcgatgcacgtcgtactgaa
atcaccgcgaacagtgcagacatcaacatcgaagacctgattaatcaggaagacgttgtg
gtgacgctgtcgcatcagggttatgtcaaataccaaccgctgacggactatgaagcccag
cgtcgcggtggtaaaggcaaatccgccgcacgtattaaagaagaagactttatcgaccgt
ctgctggtggccaacacccatgacaccattctgtgcttctccagccgtggccgtctctac
tggatgaaggtctatcagctgccggaagccagccgtggtgcgcgcggtcgtccaatcgtc
aacctgttgccgctggaagctaacgaacgtatcaccgccattctgccggtgcgtgaatac
acagaaggcttcaacatcttcatggccaccgcgagcggtaccgtgaagaaaaccgcgttg
caagagttcagccgtccgcgtagcgcgggcatcatcgccatcaacctgcgtgaggatgat
gagctgattggtgtggcgctgaccaacggtagcgacgaagcgatgctgttctctgccgcc
ggtaaagtggtgcgcttcgctgaaactgcggtacgtgcgatgggccgttcggcttcgggc
gtgcgcggtattaagctggctgaaagtgacaaagtggtgtcgctgattgtgccacgtgaa
gagggcgcgatcctcaccgtgacgcagaacggttacggtaaacgtaccgccaataccgag
tatccaaccaagtcgcgtgcgacccagggcgtgatctcgattaaagtcaccgatcgtaac
ggaccggttatcggtgcggtacaggtggtggatggcgatcagatcatgatgatcaccgat
gccggtacgctggtgcgtactcgcgtgtcagaagtcagcgtggttggccgtaacacccaa
ggcgtgattctgatccgtactgcggaagatgaaaacgtggtgggtctgcaacgcgttgct
gagccggtggaagaggaagaactcgacgccatcgacggtagcgtagcggaaggcgaggat
gatatcgcgccggaagtggacagcgacgacgaagcaccagaagctgacgacgaagagtaa
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