Pantoea sp. SOD02: NR302_13255
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Entry
NR302_13255 CDS
T10895
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
panz Pantoea sp. SOD02
Pathway
panz00071
Fatty acid degradation
panz00280
Valine, leucine and isoleucine degradation
panz00310
Lysine degradation
panz00362
Benzoate degradation
panz00380
Tryptophan metabolism
panz00410
beta-Alanine metabolism
panz00640
Propanoate metabolism
panz00650
Butanoate metabolism
panz00907
Pinene, camphor and geraniol degradation
panz00930
Caprolactam degradation
panz01100
Metabolic pathways
panz01110
Biosynthesis of secondary metabolites
panz01120
Microbial metabolism in diverse environments
panz01200
Carbon metabolism
panz01212
Fatty acid metabolism
Module
panz_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
NR302_13255 (fadJ)
00650 Butanoate metabolism
NR302_13255 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
NR302_13255 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
NR302_13255 (fadJ)
00310 Lysine degradation
NR302_13255 (fadJ)
00380 Tryptophan metabolism
NR302_13255 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
NR302_13255 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
NR302_13255 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NR302_13255 (fadJ)
00930 Caprolactam degradation
NR302_13255 (fadJ)
Enzymes [BR:
panz01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
NR302_13255 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
NR302_13255 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
NR302_13255 (fadJ)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
UVC28228
LinkDB
All DBs
Position
complement(2856725..2858854)
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AA seq
709 aa
AA seq
DB search
MSESAFHLHMRLDHVGVITIDVPGEKMNTLKAEFVPQIKAVLDEARSHQDLAGLVLISGK
PDNFVAGADISMIASCKTAEEAEALAKQGQDVMAMIAALPFPVVAAIHGACLGGGLELAL
ACDARICSLDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGLQQALPLILTGKQLRAKQALK
LGIVDDAVPQSILLETAIARVHKGKGARRELSRRDRLLQGPIARQVLFSLAQRQTHSKTQ
GNYPAADRILEVVRIGLEQGSSAGHEAEARAFGQLAMTPESAALRSLFFASTALKKESMA
SVEPQTLKQIGVLGGGLMGGGIASVTALKAGLPVRIKDINLVGVNHALQYSWDLLSNKVK
RRQMKAAERQQQMARISGGIDYQGFSQRDLVIEAVFEDLALKQQMVSEIESHCQPHTIFA
SNTSSLPIADIAAHAQRPENIIGLHYFSPVDKMPLVEVIPHANTSAQTLANTVQLARQQG
KTAVVVADRPGFYVNRILAPYINEAMHCLQEGEPIEHIDRALVKFGFPVGPLQLLDEVGI
DVGSKISPILEQAYGSRFSAPSAANAILADGRKGRKNHKGFYLYQRSRWPGKRKADASIY
TLLNIKPQAKQSEAQIAERCVMMMLNEAARCLDEAVIRNARDGDIAAVFGIGFPPFLGGP
FRYMDQRGIGDTVKALSSLMQQHGERFTPSEALIAMSEQQTNFYTSAQS
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatctgcctttcatttacatatgcgcctcgatcatgtcggtgtgattaccatc
gatgtgccgggcgagaagatgaacacgctgaaggccgaatttgtgccgcagatcaaagcg
gtgctggatgaagcgcgcagccatcaggatttagccggattagtgttgatctccggcaag
ccagacaactttgttgccggtgcggatatcagcatgatcgccagctgcaaaacggctgaa
gaagctgaagcgctggcaaagcagggacaagatgtgatggcgatgattgccgcgctgccg
tttccggtggtggcggcgattcacggtgcctgccttggcggcggcctcgagctggcgctg
gcctgcgatgcgcgcatctgttcgctggatgacaaaacgcgcctcggtttgccggaagta
cagctcggtttgctgccgggttctggcggtacgcaacgtttgccgcgcctgattggcttg
cagcaggcgctgccactgattctcactggcaaacagctgcgcgccaaacaggcgctcaaa
ctcgggattgtggatgacgcggtgccgcaatcgattctgctggaaacggcgattgcgcgc
gtacataaaggaaaaggcgctcgccgtgaactttcgcgccgcgatcgtttgctgcagggg
ccgattgcgcgtcaggtgctgttttcactggcacagcgtcaaacccacagcaaaacccag
ggcaactatcctgcggctgaccgtattcttgaagtggtgcgcatcggtctggagcagggc
agcagcgccgggcacgaagcggaagcgcgcgcctttggtcaactggcgatgacgccagaa
tcggccgcgctgcgtagcctgttcttcgcctcaaccgccttaaagaaagagtcgatggcg
agtgttgaaccgcaaacgctgaagcagattggcgtgcttggcggagggttgatgggcggc
ggcatcgccagcgtcacggcgctgaaagccggtttgccggtgcgcattaaagacatcaat
ctcgtcggcgtaaatcatgcgctgcaatacagctgggacttgttgagcaacaaggtgaag
cggcgtcaaatgaaagcggctgaacgtcagcagcagatggcgcgcatcagcggcggcatc
gattatcaagggttcagccagcgcgatctggtgatcgaagcggtatttgaggatctggcg
ctcaagcagcagatggtcagcgaaatcgaaagtcattgccagccgcacaccatatttgcc
tccaatacctcgtcgctaccgattgccgacattgccgcccatgcgcagcgaccggaaaat
attatcggcctgcattacttcagcccggtggacaaaatgccgctggtggaggtgattcca
catgccaatacctcagcgcaaacgctagcgaacacggtgcagctggcgcggcaacagggt
aaaacagcggtggtggtagcagatcgtcctggcttttatgtaaaccgcattctcgcgccc
tatataaatgaagcgatgcactgtttgcaggaaggtgagccgattgagcatatcgatcgt
gctttagtgaaattcggttttccggttgggccgttgcaactgctggacgaagtgggcatt
gatgtcggcagcaaaatcagcccgattcttgagcaggcttacggttctcgcttcagcgca
cccagcgccgcgaacgccattctggctgacggcagaaaagggcgtaagaaccacaaagga
ttctacctctaccaacgttcgcgctggccgggcaagcgcaaagctgatgcgtcaatctac
acgctgttgaacatcaaaccgcaggcgaagcagagcgaagcgcagatcgccgagcgctgc
gtaatgatgatgctgaacgaagcggcacgttgtctggatgaagcggtgattcgcaacgcg
cgcgatggcgatattgcagcggtatttggcatcggtttcccgccgttcctcggcggcccg
ttccgctatatggatcaacgcggcattggcgataccgtcaaagcattaagctcattaatg
cagcaacacggcgaacgttttacgccaagtgaggcgctgatcgcaatgtcagaacagcaa
acgaatttttacacttctgcacaatcatga
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