Pantoea sp. SOD02: NR302_15100
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Entry
NR302_15100 CDS
T10895
Symbol
tcdA
Name
(GenBank) tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
panz Pantoea sp. SOD02
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
panz03016
]
NR302_15100 (tcdA)
Transfer RNA biogenesis [BR:
panz03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
NR302_15100 (tcdA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ThiF
Sacchrp_dh_NADP
NAD_binding_7
DAO
UDPG_MGDP_dh_N
TrkA_N
3HCDH_N
ELFV_dehydrog
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
UVC28562
LinkDB
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Position
complement(3242628..3243434)
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AA seq
268 aa
AA seq
DB search
MTVVSDAWRQRFGGTARLYGQDALQRFADAHFCVIGIGGVGSWAAEALVRTGIGKITLID
MDDVCITNTNRQIHALQGKVGQAKTEVMAERMRAINPECEVICIDDFITPENTAELLSAG
FDYVIDAIDSVRPKAALIAWCRRNKIPLITTGGAGGQIDPTQIQVSDLAKTIQDPLAAKL
RERLKGDFGVVKNSKGKLGIDCVFSTEALMYPQPDGSVCTSRSTAEGPKRMDCAAGFGAA
TMVTATFGFAAVSHALKKFLAKAARQTA
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgacagtagtaagcgacgcctggcgacaacgttttggcggcacggcgcgtctctatggg
caggacgcgctacagcgttttgccgacgcgcatttttgcgtgattggtattggtggcgta
ggttcatgggcggcggaagcgctggtgcgcaccggcatcggtaaaatcaccctgattgat
atggacgatgtctgtatcaccaataccaaccgccagatccatgcgctgcagggcaaagtg
ggccaggcgaaaacagaagtgatggcggaacgtatgcgcgccatcaatccggaatgcgaa
gtgatctgtatcgatgacttcatcacgccggagaataccgccgaactgttatcggcgggt
ttcgactacgtgattgatgcgattgatagcgtgcggcccaaagccgcgttgattgcctgg
tgtcgtcgcaacaagatcccgctgattaccaccggcggcgcgggcggccagatcgatccc
acgcagatccaggttagcgatctggcgaaaaccattcaggatccgctggccgctaagctg
cgtgaaagattgaaaggggatttcggcgtggtgaagaacagcaaaggcaagctcggtatc
gactgcgtattctcgacggaagcgctgatgtatccgcagccggacggcagcgtgtgtact
tcacgctccaccgcagaagggccgaaacgtatggattgtgccgccggatttggcgcggca
accatggttaccgccactttcgggtttgcggcggtttcccatgcgttgaagaagtttctg
gcgaaggcggcgcgtcaaacggcctga
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