Pantoea sp. SOD02: NR302_15195
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Entry
NR302_15195 CDS
T10895
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
panz Pantoea sp. SOD02
Pathway
panz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NR302_15195 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
panz03019
]
NR302_15195 (rppH)
Messenger RNA biogenesis [BR:
panz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NR302_15195 (rppH)
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Paralog
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GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
UVC28578
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Position
complement(3267684..3268211)
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AA seq
175 aa
AA seq
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MIDDDGYRPNVGIVICNRQGQVLWARRFGQHSWQFPQGGINPGETAEQAMYRELFEEVGL
HRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLMCSDAEINVQHSSTPE
FDGWRWVSFWYPVRQVVSFKRDVYRRVMKEFAGVVMSMQESAGQRNNAAQRRKRG
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatgatgatggctaccgcccgaatgttggtatcgtaatctgtaacaggcaagga
caagtgttgtgggccaggcgctttggacagcactcctggcaatttcctcagggaggcatc
aatccgggtgaaactgctgaacaggcgatgtatcgcgaactgttcgaagaagtgggttta
caccgcaaagatgttcgaatacttgcttcaacccgaaactggttacgctacaagttgcca
aaacgtttggtgcgttgggacacaaagccggtgtgtatcggccagaaacaaaagtggttt
cttctgcagttgatgtgtagtgacgcggaaatcaatgtgcagcacagcagcacgcccgag
tttgatggttggcgctgggttagcttctggtatccggtacgtcaggtggtctctttcaag
cgcgatgtgtatcgccgcgtaatgaaagaattcgcgggcgtagtgatgtctatgcaggag
agtgcggggcagcggaataacgccgcccaacgacgtaaaagaggatag
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