Pantoea sp. SOD02: NR302_15340
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Entry
NR302_15340 CDS
T10895
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
panz Pantoea sp. SOD02
Pathway
panz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NR302_15340 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
panz01007
]
NR302_15340 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
panz03016
]
NR302_15340 (lysS)
Enzymes [BR:
panz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
NR302_15340 (lysS)
Amino acid related enzymes [BR:
panz01007
]
Aminoacyl-tRNA synthetase
Class II (A)
NR302_15340 (lysS)
Transfer RNA biogenesis [BR:
panz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
NR302_15340 (lysS)
Prokaryotic type
Other AARSs
NR302_15340 (lysS)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
UVC28607
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Position
complement(3306170..3307690)
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AA seq
506 aa
AA seq
DB search
MSEQQPQSADAALELNNELKARREKLSALREKGVAFPNDFRRDTTSDVLHASYDAKENEE
LEALGVEVSVAGRMMTRRIMGKASFATLQDVGGQIQIYVSRDDLPEGVYNEQFKKWDLGD
ILGARGKLFKTKTGELSIHITELRLLTKALRPLPDKFHGLADQETRYRQRYLDLISNDDS
RKTFKIRSQIMAGIRQFMVNREFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAP
ELYLKRLVVGGFDRVFEINRNFRNEGISPRHNPEFTMMELYMAYADYKDLIELTESLFRT
LAQDVLGTTEVPYGDHSFDFGKPFEKLTMREAIKKYRPETDLSDLEDFDKAVAIAKSLHI
KVEKSWGLGRVVTEIFEETAEAHLIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGG
REIGNGFSELNDAEDQAERFLQQVNAKESGDDEAMFYDEDYVTALEHGLPPTAGLGIGID
RMVMLFTNSHTIRDVILFPALRPTGK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacaacaaccgcagagcgctgatgccgcccttgagttaaacaacgaactgaaa
gcgcgtcgcgaaaaactcagcgcgctgcgtgaaaaaggcgtggcgtttcctaacgatttc
cgccgcgacaccacgtccgatgtgctacacgccagctatgacgctaaagagaacgaagag
ctggaagcgctgggcgtagaagtgagcgtggccggtcgtatgatgacgcgccgcatcatg
gggaaagcgtcattcgctaccctgcaggatgtcggcggccagattcagatctacgtctca
cgtgacgatctgccagaaggcgtctacaacgagcagttcaaaaagtgggatctcggcgat
atcctcggtgcgcgcggtaagctgttcaaaaccaaaaccggtgagctgtcgatccacatc
actgagctgcgtctgctgaccaaagcgctgcgtccgctgccggacaaattccacggcctg
gccgatcaggaaactcgttatcgtcagcgttatctcgatctgatctccaacgacgattcg
cgcaaaaccttcaaaattcgctcacaaatcatggccggcattcgccagttcatggttaac
cgcgagtttatggaagtggaaaccccgatgatgcaggtgattcctggcggcgcgtctgcg
cgtccgttcatcacccatcacaatgcgctcgacatcgatatgtacctgcgtattgcacca
gaactgtatctgaagcgcctggtagtaggcggatttgatcgcgtgttcgagatcaaccgt
aacttccgtaacgaaggcatttcgccgcgccataatccagagttcaccatgatggaactc
tatatggcgtatgcggattacaaagatctgatcgagctgactgaaagcctgttccgtacc
ctggcgcaggatgtgctgggcaccacggaagtgccgtatggcgatcacagcttcgatttc
ggtaagccgtttgagaagctcaccatgcgtgaagcgatcaagaaataccgtccggaaacc
gacctgagcgatctggaagacttcgataaagcggtagcgattgctaaatcgctgcacatc
aaagtcgagaagagctggggcctcggccgcgtagtaacggagatcttcgaagagaccgct
gaagcgcacctgattcagccaaccttcatcaccgaatacccggctgaagtgtcaccgctg
gcgcgtcgtaatgacgagaacccggaaatcaccgaccgctttgagttcttcatcggcggc
cgtgaaatcggtaacggcttctcggagctgaacgatgcagaagatcaggctgagcgtttc
ctgcagcaggtgaatgcgaaagagtctggcgatgacgaagcgatgttctacgacgaagac
tacgtcaccgcgctggagcacggcctgccgccaaccgcaggtttgggcattggtatcgac
cgtatggtgatgttgttcaccaacagccacaccatccgtgacgtcattctgttcccggca
ctgcgcccgaccggtaagtaa
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