Pantoea sp. SOD02: NR302_15985
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Entry
NR302_15985 CDS
T10895
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
panz Pantoea sp. SOD02
Pathway
panz00550
Peptidoglycan biosynthesis
panz01100
Metabolic pathways
panz01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NR302_15985 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NR302_15985 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
panz01011
]
NR302_15985 (mrdA)
Enzymes [BR:
panz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NR302_15985 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
panz01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
NR302_15985 (mrdA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UVC28726
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Position
complement(3464836..3466710)
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AA seq
624 aa
AA seq
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MNFRNFEAEEKLFARRAIVAFALVVICFTILGINLYRLQVDQHSYYQTRSNENDIKMIPI
APTRGLIFDRNGIPLVRNVSWYDIHITPYKIDNMQETLKELTPIVDLTPEEIETFEHELK
QNSRYKPVELKAELTDEEVARFAVNQFRFTGVTVDTYQDREYPYGADLAHVLGYVSKIND
NDYKRLNAEGVGENYAADHNIGKQGIEGYYESLLHGKTGYQEVEVDNHGRIVRVLKEVPP
VAGQNITLTLDLHLQQYVESQLAGQRAAALIEDPHDGSVLAMVSAPSYDPNPFVKGISYK
AYKTLLQDKDLPLINRVTQGLYPPASTVKPYMAMSALLTKVITPSFTIFGAPTWTLPGTD
RKYRDWKKTGHGMLDVTKAIEESADSFFYQVAFMMGIDRIHTMLSQFGYGKSTGIDLNEE
YAGLLPSREWKQKVHKKMWYQGDTVSVGIGQGYWVATPIQMVKALVALLNNGRVINPHLL
EKSQRGTVVQPYQAKLPQPQIGDAKSPYWSLVRHAMFGMANAPNGTGYKYFHTAPYGIAA
KSGTSQVFSLKKNQIYNAKMTPMRLRDHIFYTAFAPFNDPKVAVALILENGGNEGVTAAP
LMRNILDHIFVPEATPPPVATAAQ
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaatttccgtaatttcgaagcagaagaaaagctgtttgcccgccgtgcgattgtcgct
tttgccctggttgtcatctgctttaccattttaggcatcaacctgtatcgcttacaggtc
gatcagcacagctattaccagacgcgttccaacgagaacgacatcaaaatgatcccgatt
gcgcccacgcgcgggctgatctttgatcgcaacggcattccgctggtgcgcaacgtcagc
tggtacgacattcacatcacgccgtacaaaatcgacaacatgcaggaaacgctgaaagag
ctgacgccgattgtcgatctcacgccggaagagattgaaaccttcgagcacgagctcaaa
cagaacagccgctacaagccggttgaactgaaagcggaactgactgacgaagaagtggcg
cgcttcgccgtcaatcaattccgctttaccggcgtcaccgttgatacctatcaggaccgc
gaatatccgtacggcgccgacctggcgcacgtgctcggctacgtctcgaaaatcaacgat
aacgactacaaacgcctgaatgcagaaggcgttggcgagaactacgcggcggaccacaac
atcggtaagcagggcattgaaggctattacgaatcgctgctgcacggcaaaaccggctat
caggaagtggaagtggataaccacggccgcatcgtgcgcgtgctgaaagaggtgccgccg
gttgctggtcagaacatcacgctaacgctcgatctgcatttgcagcagtatgtcgagagc
caactggccgggcaacgtgcggcggcgctgattgaagatccgcacgacggcagcgtgctg
gcgatggtttctgcgccgagctacgatcccaacccgttcgtcaaaggcatcagctacaaa
gcctataaaaccctgctgcaggataaagacctgccgctgatcaaccgcgtcacccaaggc
ttgtatccgccggcgtccacggtaaaaccctatatggcgatgtcggcgctgctgaccaaa
gtcatcacgccgagcttcacgatatttggcgcgcccacctggacgctgccgggcaccgat
cgtaaatatcgcgactggaaaaaaaccggtcacggcatgctggacgtgacgaaagccatc
gaagagtcggcggatagcttcttctatcaggtggcgttcatgatgggcatcgatcgcatc
cacaccatgttgagccagtttggttacggcaaatccaccggcatcgatctcaacgaagag
tacgccggattattgcccagccgtgaatggaagcaaaaagtgcacaaaaagatgtggtat
cagggcgataccgtttcggttgggattgggcaaggttattgggtggcgacaccgatccag
atggtgaaagcgctggtggcgctgttgaataatggccgcgtcattaatccgcatctgctg
gagaaatcgcagcgcggcacggtagtgcagccgtatcaggcaaaattaccgcagccgcag
attggtgatgccaaatcgccgtactggtcgctggtgcgccacgccatgttcggcatggcg
aatgcgccaaacggcaccggctacaaatacttccacaccgcgccgtacggcattgcggcg
aaatcgggtacttcgcaggtattcagcctgaaaaagaaccagatctataacgccaaaatg
acgccaatgcgcctgcgagaccatatcttctacaccgcgtttgcgccgtttaacgacccc
aaagtggcagtggcgttgattctggaaaacggtggcaacgaaggcgtcacggcggcgccg
ctgatgcgtaatattctcgaccacatctttgtgccggaagccacaccgccgccggtagca
acggccgcgcagtaa
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