Pantoea sp. SOD02: NR302_16265
Help
Entry
NR302_16265 CDS
T10895
Name
(GenBank) Ig-like domain-containing protein
KO
K20276
large repetitive protein
Organism
panz Pantoea sp. SOD02
Pathway
panz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NR302_16265
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Big_13
Big_6
Big_3_5
Cadherin_5
Big_9
CBM_6
CatAgl_D1
CshA_repeat
Motif
Other DBs
NCBI-ProteinID:
UVC28777
LinkDB
All DBs
Position
complement(3533920..3536100)
Genome browser
AA seq
726 aa
AA seq
DB search
MNVSPVSVAVIDKKTITKAEVLRADKNGKAAKIQAITNGKYMLTQGNDGVAPENITVKRV
GKNLLVMLEGSTASQPDLIIEDFFTKSGSLVGKAEDGEMHEYVATDGRSDHDAAALADGE
TAALALGEGVVETDSGFTLASGFEWSPALIALGGLAAIAAAAGLGYVAAKDQYQDKNSSN
GNSSGGGDNGKGGDGGEGGGDTGGRDVKVPTVNGLYDDVGSITGLIAKGGRTDDTTPTLN
GMGTKGNIIEIWDGATKIGETTVGENGTWSFTPGKAFTAGSHSIITRERNENGVVGEYSD
PWDFVVDLTAPAKGTIGGLFDDSENPPKEITKGGVTKDSTPTLSGTAEANSTIEIWKDGK
LQGTVKVDSEGKWSYTSPTLEDGKHDFSIVVVDQVGNKSLPSDAWIVEVDTVAPENKGIG
QIVDSEGNPIAAGSETEDSKPTFTGTGEKGDIIKIIDNGKVIGTAIVDDKGEWSFTPEKS
VGNGEHEFQIIVVDPAGNESAASDKVTIGVDDPLAPVDPGDEVVPNPEVPVTGTIDKVII
DNNDAGFRTEIGNGGAVNDTTPIIEGSGNNGDIVYLWLTGKTHNFYFSTVVDANGKWSFE
TPALPDDEYNIEAAFKDADGVVTDKTSVFELEIDTMPPPQPIIDFFSYDLNGLDLPELLS
DQNDALFTTEPVEPVSLDNLHDFLLNDITFTTDVNKLSSTGLLTQNNESVNSFPAIDDYL
NQSSHN
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtttcgcccgtaagtgttgcggttattgataaaaaaaccattactaaagcggaa
gtactgcgagctgataaaaacggcaaagcagcaaaaattcaagcgatcaccaatggcaaa
tatatgctcacgcaaggtaatgatggcgtagcgccagaaaatattactgttaagcgcgta
ggcaaaaatttgctggtaatgctggaaggttccacagccagccagcctgatctgatcatt
gaagactttttcactaagtcaggctcattggtgggtaaagccgaagatggcgaaatgcat
gaatatgttgcgactgatggccgttcagatcacgatgctgctgcacttgctgatggcgaa
actgctgcactagctttaggtgaaggtgtcgttgagaccgattcaggttttacgctggca
tcaggttttgaatggtcaccagcattgattgcgttgggtggcttagcggcaatcgcggct
gcagcgggccttggttatgtggcggcaaaagatcaataccaggataaaaacagcagcaat
ggcaacagcagcggtggcggtgacaatggtaaggggggcgatggtggtgagggcggtggt
gatacaggcggccgtgatgtaaaagtcccaacggtaaacgggctgtatgatgacgtaggc
agcatcacgggattgattgctaaaggtggcaggactgatgacaccacgccaacgttaaat
ggcatgggtacaaaaggtaatatcatcgaaatttgggatggtgcgaccaaaattggtgaa
accaccgtcggcgaaaatggcacctggtcattcacgccaggcaaagcgtttactgcaggc
agccatagcatcatcacacgcgagcggaacgaaaatggtgtcgtaggcgagtacagtgat
ccctgggactttgtcgttgatttgacggcacctgcaaaaggaaccattggtggattgttt
gatgacagtgagaacccgccaaaagaaatcactaaaggcggcgtaactaaagacagcaca
ccaacgctttccggcaccgcagaagcaaactctaccattgaaatctggaaagatggcaag
ctgcaaggcacggtaaaagtggatagcgaaggtaaatggagttacaccagcccgacttta
gaagatggtaaacacgatttcagtatcgtcgtagtagatcaagttggtaacaaatctctg
ccgtctgacgcatggattgttgaagttgatacagtagcgccggaaaataaaggcattggt
cagatagtagatagcgaaggcaatccaatcgctgctggtagcgagaccgaagacagtaaa
ccaacctttactggtactggcgaaaaaggcgatatcatcaaaatcattgataatggtaaa
gttattggtacagcgattgttgatgataaaggcgaatggagcttcacgccggagaaatct
gttggcaatggtgaacatgagttccagatcatcgtagttgatcctgctggaaatgaatct
gcagcatctgacaaggtgacaattggtgtggatgatccacttgcaccagtcgatccgggc
gatgaagttgtcccgaatccggaagtaccggtcactggtacaatcgataaagtcattatt
gataataatgatgcaggtttcagaacagagattggcaatggtggcgcggtgaacgatacg
acgccaattattgaaggttcgggtaataatggggatatcgtatatctgtggctcacagga
aaaacgcataatttctatttttcaacagtcgttgatgccaacggtaaatggagctttgaa
acacctgcgctgcctgatgatgaatataacattgaagctgcattcaaagatgccgatggt
gtcgtaacggataaaacttcggtgtttgaattagaaattgatacaatgccaccgccacaa
ccgatcattgatttcttctcttatgacctgaatgggttagacctgcctgaattactttca
gatcaaaatgacgcattgttcacaacagaacctgttgagccggtttcattagataatttg
catgattttttattgaatgacatcacgttcactacggatgtcaataaattatcctccacc
ggtttgttaacgcaaaataacgaaagcgttaacagttttccggctatcgatgattattta
aatcagtcatcacataattaa
DBGET
integrated database retrieval system
