KEGG   Pantoea sp. SOD02: NR302_16750
Entry
NR302_16750       CDS       T10895                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
panz  Pantoea sp. SOD02
Pathway
panz03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:panz00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NR302_16750 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:panz02044]
    NR302_16750 (tssH)
Secretion system [BR:panz02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NR302_16750 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small Clp_N AAA_22 AAA_16 NBD_SMAX1 nSTAND3 Zeta_toxin AAA_7 DUF3584 NACHT Sigma54_activat bpMoxR nSTAND6 AAA_24 AAA_25 AAA_29 ResIII IstB_IS21 ATPase_2 DUF815 SRP54 Snapin_Pallidin SKA2 FTA4
Other DBs
NCBI-ProteinID: UVC28867
LinkDB
Position
complement(3623939..3626545)
AA seq 868 aa
MDSQSAALLRRLNPFCAQALESAASLCQTRAHAEIQPEHWLLKLLEQGEGDITIIARRYE
WGMDAIWQDLLAFLDRQPRAVRGRPQLSSSLEALLKQAWLMASASDNNPQIRSIHLLMAL
SEQPKIAQCEGLWPLLNLRMSQLERLQPMLDAQSDERAEAEQPEMPVSTIEQTAPGETRT
SSTEALARFTRDVTADARSGKIDPVFGRDNEIRQMVDILSRRRKNNPILVGEPGVGKTAL
VEGLALRIAEGNVPDSLKPVSVHTLDLGMLQAGAGVKGEFEQRLKNIITEVQAAPNPVLL
FIDEAHTIIGAGNVAGGADAANLLKPALARGELRTIAATTWSEYKQYFEKDAALERRFQM
VKVDEPDDDAACLMLRGLKSRYAEHHGVHITDAAVRAAVTLSRRYLTGRQLPDKAVDLLD
TAAARVRMSQDTVPEAITRLRAKLDALNIEQRAILDDEALGGAISQERLTEIATQIASTD
EELEALEQRYADVQARMQQLLDSRKDSAQRNTIAQLQSELDALQPGEPLLTADVDARIVA
GVIADWTGVPLSSLMKDEQAELLTLETQLASRVVGQDTALNAIAQRLRASKTGLTSENGP
QGVFLLVGTSGTGKTETALALADLLYGGEKSLITINLSEYQEAHTVSQLKGSPPGYVGYG
QGGILTEAVRKRPYSVVLLDEVEKAHRDVINLFYQVFDRGFMRDGEGREIDFRNTVILMT
SNLGSDALMPLLEEMPEAAESDLQECLRPILRDHFQPALLARFQTVIYRPLARNAMRIIV
EMKLSQVSQRLQRHYGLNVSIDESLYDALTAACLLPDTGARNVDSLLNQQILPVLSQQLL
QYIAASQRPKTLLLGWDDEEGVVMEFGE
NT seq 2607 nt   +upstreamnt  +downstreamnt
atggacagtcagtcagccgcgcttctgcgccgtctcaacccgttctgcgcgcaggcgctg
gaatccgccgcctcgctgtgtcagacccgcgcgcacgctgaaatccagccagagcactgg
ctgctcaagctgctggagcagggcgagggcgacatcaccatcatcgcgcgccgctacgag
tggggtatggacgccatctggcaggacctgctggcgtttctcgaccggcagccacgcgcg
gtgcgcggacgtccgcagctttcttcttcgctcgaagcactgctgaaacaggcgtggttg
atggcctccgcatctgataacaacccgcaaatccgcagcattcatctgctgatggcgctg
tccgagcagccaaaaattgcgcagtgcgaaggcctgtggccgctgctcaacctgcgcatg
agccagcttgagcgcctgcagccgatgctggacgcacagtccgacgagcgtgcggaagcg
gagcaaccggagatgccggtcagcactatcgaacagaccgcccctggcgaaaccagaact
tcctccaccgaagcgcttgcccgtttcacccgcgacgtcaccgccgacgcgcgcagcggc
aaaatcgacccggtctttggccgcgacaacgaaatccgccagatggtcgatatcctgtcg
cgtcgccgcaagaacaacccgattctggtcggcgagccgggcgtgggcaaaaccgcgctg
gtggaagggctggcgctgcgcatcgctgaaggcaacgtgccggacagcctgaagccggtc
agtgtgcacacgctggacctcggcatgctgcaggcgggggcgggcgtgaagggcgagttc
gagcagcgcctgaaaaacatcatcaccgaagtgcaggccgcgcccaatccggtgctgctg
tttatcgacgaagcgcacaccatcatcggcgcgggcaacgtagcgggcggcgcggacgcg
gctaatctgctgaaaccggcgctggcgcgcggcgagctgcgtaccatcgcggccaccacg
tggagcgaatacaaacagtattttgagaaggacgccgcgctggagcgccgcttccagatg
gtcaaagtggacgagccggacgacgacgccgcgtgcctgatgctgcgcggcctcaagtcc
cgctacgcggagcaccacggcgtgcacatcaccgacgcggcggtgcgcgcggccgtcacg
ctgtcgcgccgctaccttacaggccgccagctgccggacaaggcggttgacctgctcgac
accgccgccgcgcgcgtgcgcatgagtcaggacacggtaccggaagccatcacccgctta
agagcgaagctcgacgcgctgaacatcgagcagcgcgccatcctcgacgacgaagcgtta
ggcggcgctatttcgcaggagcgcctgactgaaatcgccacgcagattgcctcaaccgat
gaagaacttgaagcgctggagcagcgttacgccgacgtgcaggcacgcatgcagcaactg
ctcgactcccgcaaagactcagcgcagcgcaataccatcgcgcagctccagagcgaactc
gacgcattacaacccggcgagccgctgctgaccgccgacgtcgacgcgcgcatcgtggcg
ggcgtgattgccgactggaccggcgtgcctctgtcgtcgctgatgaaggatgagcaggcg
gagctgctgacgctggaaacccagctcgccagccgcgtggtcgggcaggacacggcgctg
aatgccattgcccagcgcctgcgcgcctcgaaaaccggactcacttcggaaaacggtccg
cagggcgtgttcctgctggtcggcaccagcggcaccggcaaaaccgaaaccgcgctggcg
ctggctgatttgctgtacggcggcgagaagtcgttaattaccatcaacctcagcgaatac
caggaagcgcacaccgtttcccagctcaaaggctcaccgccgggttacgtcggctacggc
cagggcggcatcctcaccgaagcggtgcgcaagcgtccgtacagcgtggtgctgctcgac
gaggtggaaaaggcgcaccgcgacgtcatcaatttgttctatcaggtgtttgaccgtggt
tttatgcgcgacggcgaagggcgcgaaatcgacttccgcaacaccgtgattctgatgaca
tccaacctcggcagcgacgcgctgatgccgctgctggaagaaatgcccgaagccgccgaa
tccgaccttcaggagtgcctgcgtccgatcctgcgcgaccacttccagcccgcgctgctg
gcgcgcttccagacggtgatttaccgcccgctggcgcgtaacgccatgcgcatcatcgtg
gagatgaagctcagccaggtcagccagcgtctgcaacgccattacggcctgaacgtgagc
attgatgagagtctctatgatgcactgactgcggcttgtctattaccagacaccggcgca
cgcaatgtcgacagcctgctcaatcagcagatcctgccggttttgagtcagcaactgctg
caatacattgccgccagtcaacgccccaaaacgcttttgctgggttgggatgatgaagag
ggcgtagtgatggagtttggagaataa

DBGET integrated database retrieval system