KEGG   Pantoea sp. SOD02: NR302_16775
Entry
NR302_16775       CDS       T10895                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
panz  Pantoea sp. SOD02
Brite
KEGG Orthology (KO) [BR:panz00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:panz02044]
    NR302_16775 (tssC)
Secretion system [BR:panz02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NR302_16775 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: UVC28872
LinkDB
Position
complement(3630988..3632535)
AA seq 515 aa
MLMSVQNETHANGATTVLDRPAAGGVYASLLKKINLNPVSELSDLNVWQDNQAMSDATAD
ERVTAAMQVFLTRLKISGAKVEKLDKNLLDHHIAELDRQISRQLDAVMHHDEFQKVESAW
RGLKSLVDKTDFRQNVKIEVLDVSKDDLRQDFEDAPEIIQSGLYLQTYVAEYDTPGGEPI
GAVISAYEFDASAQDIALLRNLSKVAASAHMPFIGSVGPQFFLKESMEEVAAIKDIGNYF
DRAEYIKWKSFRDTDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYIEEVKGPDHDKYLWT
NASFAFAANMVQSFISNGWCVQIRGPQAGGAVQDLPIHLYDLGTGNQVKIPSEVMIPETR
EFEFANLGFIPLSYYKNRDYACFFSANSTQKPAIYDTADATANSRINARLPYIFLLSRIA
HYLKLIQRENIGTTKDRRLLELELNTWVRTLVTEMTDPGDELQSSHPLRDAKVLVEDIED
NPGFFRVKLFAIPHFQVEGMDVNLSLVSQMPKAKA
NT seq 1548 nt   +upstreamnt  +downstreamnt
atgctgatgtcagttcagaatgaaacccatgctaacggcgcaaccaccgtgctggatcgc
ccggctgcgggcggcgtctacgcgtcgctgttaaaaaaaatcaacctcaatccggtgtca
gagctgagcgacctcaacgtctggcaggacaatcaggcgatgtctgatgccaccgccgac
gaacgcgtgacagccgcgatgcaggtgttcctgacgcgcctgaaaatcagcggcgcgaaa
gtggagaagctggataaaaacctgctggatcaccatatcgctgagctggaccgccagatc
agccgccagctcgacgcggtgatgcatcacgacgagttccagaaagtggaatcggcgtgg
cgaggcctgaagtcgctggtggataaaaccgacttccgccagaacgtgaaaatcgaagtg
ctggacgtgtcgaaagacgacctgcgtcaggactttgaagacgcgccggaaatcatccag
agcgggctctatctgcagacctacgtggcagaatacgacacgccgggcggcgagccgatt
ggcgcggtgatttcagcttacgagttcgatgcttctgcacaggacatcgcgctgctgcgc
aacctgtcgaaagtagcggcctccgcgcacatgccgtttatcggttctgttggtccgcag
ttcttcctcaaagagtcgatggaagaagtggcggcgattaaagacatcggcaactacttt
gaccgcgccgaatacatcaagtggaagtcgttccgcgacaccgatgattcacgctacatc
ggcctgaccatgccgcgcgtgctcggtcgtctgccgtatggcccggataccgtgccggtg
cgcagcttcaactacatcgaagaggtgaaaggcccggaccatgataaatacctgtggacc
aacgcctcgttcgccttcgccgctaacatggtgcagagcttcatcagcaacggctggtgc
gtacaaatccgtggcccgcaggctggcggtgcggtgcaggatctgccaatccacctgtac
gatctcggtaccggcaaccaggtaaaaatcccgtctgaagtgatgatcccggaaacccgc
gagttcgagttcgccaacctcggcttcatcccactttcttactacaagaaccgtgattac
gcctgcttcttctcagctaactcgacgcagaaaccggcaatctacgacaccgccgatgcc
accgctaacagccgcatcaacgcgcgtctgccgtacatcttcctgctgtcgcgcatcgcg
cactacctgaagctgatccagcgcgaaaacatcggcaccaccaaagatcgccgcctgctg
gagctggaactgaacacttgggtgcgcacgctggtgaccgagatgaccgatccgggtgac
gagctgcagtcttcacatccgctgcgcgatgcgaaggtgctggttgaagatatcgaggac
aacccgggcttcttccgcgtcaagctgttcgccatcccgcacttccaggtggaaggcatg
gacgtgaacctgtcgctggtatctcagatgccgaaggccaaggcttaa

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