Pantoea sp. SOD02: NR302_16805
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Entry
NR302_16805 CDS
T10895
Symbol
ddlA
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
panz Pantoea sp. SOD02
Pathway
panz00470
D-Amino acid metabolism
panz00550
Peptidoglycan biosynthesis
panz01100
Metabolic pathways
panz01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NR302_16805 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NR302_16805 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NR302_16805 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
panz01011
]
NR302_16805 (ddlA)
Enzymes [BR:
panz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
NR302_16805 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
panz01011
]
Precursor biosynthesis
Amino acid ligase
NR302_16805 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
GARS_A
RimK
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
UVC28878
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All DBs
Position
3640360..3641454
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AA seq
364 aa
AA seq
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MVKQRVGIVFGGKSAEHEVSLQSAKNILEAIDKSKYDVVLLGIDKQGEWHLNDASGFLLN
AENPKLIALNRSGENVALVPGSSSQQLITRQQAQPLSQLDVIFPIVHGTLGEDGSLQGLL
RMANLPFVGSDVLGSAVSMDKDFTKRLLRDAGLNVAPWLSVTQAQRASINAEAVIARFGL
PLFIKPANQGSSVGVSKVDSAEAFDAALDLAFTFDRKVLIEQGIKGREIECAVLGNDAPE
ASPCGEVVVHDAFYSYDTKYISESGAQVVVPAAISDEASEAIRQVAITAFQALECFGMAR
VDVFLTESGEIIVNEVNTLPGFTNISMYPKLWQAAGLSYSDLISRLIELAQQRHQQTSQL
KSSV
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaacagcgcgtagggatcgtgtttggcggcaaatcagccgagcatgaagtgtca
ttacaatcagccaaaaacatcctcgaagccatcgataagagcaagtatgacgtggtgtta
ctgggcattgataaacagggtgaatggcatctcaatgatgcatcaggatttttgctcaac
gctgagaatccgaagctgattgcccttaatcgttcaggtgaaaatgtcgcgctggtacca
ggaagttcgtcccagcagttgattacccgtcagcaagcgcagccgttgtcacagctggat
gtcattttccccatcgtgcacggcacgctgggtgaagatggttcgctacagggcttatta
cgtatggcgaatctgccgtttgtcggctctgacgtgctcggttctgcagtcagcatggac
aaagatttcaccaagcgcctgctgcgtgatgccgggctgaacgtcgccccctggctgagc
gtgacgcaggcacagcgtgcgagtattaatgctgaggccgtgattgcgcgctttggtctg
ccgctgtttatcaaaccggctaatcagggatcgtccgtcggcgtaagcaaagtggacagc
gctgaagcgttcgatgctgcgctggatctggcctttacgtttgaccgcaaagtcttaatc
gagcaagggatcaagggacgcgagattgagtgtgcggtgctcggcaacgatgcaccagaa
gccagcccgtgcggcgaagtggtagtccatgatgccttctactcctacgacaccaaatat
atcagcgaaagcggcgcgcaagtagtggtgccagcagcgatcagcgatgaagccagcgag
gcaattcgtcaagtggcgattaccgcgtttcaggcgctggagtgttttggtatggcgcgt
gttgacgtgttcctgacggaaagcggcgagatcattgttaatgaagtgaacaccttgccc
ggcttcaccaacatcagcatgtatccgaagttatggcaggcggcgggcttaagctacagc
gatctgatttcacgtctgattgagctggcacagcagcgccatcagcagaccagccaactg
aaaagcagcgtgtaa
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