Pantoea sp. SOD02: NR302_18225
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Entry
NR302_18225 CDS
T10895
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
panz Pantoea sp. SOD02
Pathway
panz00860
Porphyrin metabolism
panz01100
Metabolic pathways
panz01110
Biosynthesis of secondary metabolites
panz01120
Microbial metabolism in diverse environments
panz01240
Biosynthesis of cofactors
Module
panz_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
panz_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
NR302_18225 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
panz04147
]
NR302_18225 (hemB)
Enzymes [BR:
panz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
NR302_18225 (hemB)
Exosome [BR:
panz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
NR302_18225 (hemB)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
UVC29139
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All DBs
Position
3918656..3919633
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AA seq
325 aa
AA seq
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MSEFNLIQRPRRLRKSASMREMFQESNLSINDLALPIFVEEGVDDYVPINAMPGVVRIPE
KRLAYEIERIAKAGIRSVMTFGISHHTDATGSDAWNENGLVARMSRICKDTVPEMIVMSD
TCFCEYTSHGHCGVLCDHGVDNDQTLINLGKQAVVAAQAGADFIAPSAAMDGQVKAIRQA
LDAAGFTDTAIMSYSTKFASSFYGPFREAAGTALKGDRKTYQMNPMNRREALRESLLDEA
EGADSLMVKPAGAYLDILRDIRERTTLPLAAYQVSGEYAMIKFAAQAGAIDERNVILESL
GAIKRAGADLIFSYFALDLAEQKVL
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatttaatctgatccagcgcccaagaaggctgcgtaaaagcgcgtcaatgcgc
gaaatgttccaggaatccaacctcagcatcaacgatctggcactaccgatcttcgttgaa
gaaggtgtggacgattacgtgccaattaacgccatgccgggcgtggtgcgtattccagaa
aaacgtttggcgtatgagatcgaacgtattgccaaagcgggtattcgttcagtgatgacc
ttcggcatttcccaccataccgacgccaccggcagcgatgcctggaatgaaaacggtttg
gtggcacgtatgtcgcgtatctgcaaagacaccgtgccagaaatgatcgtgatgtctgat
acctgtttctgcgaatacaccagccacggccattgcggcgtgctgtgcgatcacggcgtt
gataacgaccaaacgctgattaatctcggtaagcaagccgtggtggcagcgcaagccggc
gccgactttatcgccccttctgccgcgatggatggccaggtgaaagccattcgtcaggcg
ctcgacgccgcaggtttcaccgacaccgctatcatgtcgtattcgaccaagttcgcctcc
tccttctacggcccgttccgtgaagcagcaggcaccgcgctgaaaggcgatcgtaagact
tatcagatgaatccaatgaaccgccgtgaagcgctgcgcgagtcgctgcttgatgaagcg
gaaggcgcagattcactgatggtgaaaccagcgggtgcttacctcgatatcctgcgcgat
atccgcgaacgcaccacgttgccgctggcggcgtaccaggtgagcggtgagtacgcgatg
atcaaattcgccgcacaggcgggcgccatcgacgaacgtaatgtgattctggaaagcctg
ggcgcgattaaacgtgccggtgccgatctcattttcagctattttgcccttgatctcgcc
gagcaaaaagtgctctga
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