Pantoea sp. SOD02: NR302_19390
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Entry
NR302_19390 CDS
T10895
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
panz Pantoea sp. SOD02
Pathway
panz03030
DNA replication
panz03410
Base excision repair
panz03420
Nucleotide excision repair
panz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NR302_19390 (polA)
03410 Base excision repair
NR302_19390 (polA)
03420 Nucleotide excision repair
NR302_19390 (polA)
03440 Homologous recombination
NR302_19390 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
panz03032
]
NR302_19390 (polA)
03400 DNA repair and recombination proteins [BR:
panz03400
]
NR302_19390 (polA)
Enzymes [BR:
panz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NR302_19390 (polA)
DNA replication proteins [BR:
panz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NR302_19390 (polA)
DNA repair and recombination proteins [BR:
panz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NR302_19390 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NR302_19390 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UVC29358
LinkDB
All DBs
Position
complement(4165462..4168254)
Genome browser
AA seq
930 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLKSLLMQYQPSHVAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHEMVKAMGLPLLAVSGVEADDVIGT
LALEAEKLGRPVLISTGDKDMAQLVTPAITLINTMTNTVLGPEEVEQKYGVPPALIIDFL
AMMGDSSDNIPGVPGVGEKTAQALLQGLGGMQSIYDNLDKVADLSFRGAKTMAAKLEQNR
DVAFLSYRLATIKTDVELDLTCDQLVVNEPNVEALQTLFSRYEFKRWITDLQDGSWLQQG
KKSNAQAKKAQLSEPAAPAAEATSVLSADGYVTILDEATFAEWLKKLKSAELFAFDLETD
SLDTLSANIVGIGFAVAPGEAAYLPVAHDYLDAPDQLDRSEVLKQLKPLLEDGKAAKVGQ
NLKYDRGVLKNYDIELNGIKFDTMLESYCLNSVGGKHDMDSLAARWLNHKTVTFEEIAGK
GKNQLTFNQIAIEQAGHYAAEDADVTLQLHLKMWDKLEPEAGPKQVFEEIEMPLLKVISR
IERNGVLIDQNILAKHSQELTTRVAELELKAHELAGEPFNLSSPKQLQTILFEKQGIKPT
KKTPGGAPSTSEEVLAELALDYPLPKVILEHRGLSKLKSTYTDKLPLMINPVTGRVHTSY
HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAGPGNRIVAADYSQIELRIMAHLSQ
DKGLLDAFAQGEDIHRATASEVFGVALSKVSGEQRRSAKAINFGLIYGMSAFGLSRQLNI
GAGEAKKYMDLYFERYPGVLRYMEETRAKAAEKGYVETLDGRRLWLPDITSSNAIRRKAA
ERAAINAPMQGTAADIIKRAMIAVDGWLLEQKDDAVRMIMQVHDELVFEIRSDAIDGSIK
TIRDLMENSMKLDVPLQVEVGTGNNWDEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaattgcagaaaatcccctgattctggtcgacggctcatcttatctgtaccgt
gcatatcatgcctttccgccgctaacgaacagtgcaggcgagccaactggcgccatgtat
ggtgtgctcaatatgctgaagagcctgttgatgcagtatcagccaagccatgtggctgtg
gtcttcgatgccaaaggcaaaactttccgcgatgagctctttgagcactacaaatcgcac
cgtccgccgatgccagacgatctgcgagcgcagattgagccgctacatgaaatggtcaaa
gcgatgggcctgccgctgttggcggtctctggcgttgaggcggatgatgtcatcggtacg
ctggcgctagaggcggaaaaactcgggcgcccggtgttgatcagcaccggcgataaagat
atggcgcagttggtgacgcctgcgatcaccttgatcaacaccatgaccaataccgtgctt
ggtccggaagaggtcgagcagaaatatggcgtgccacccgcgttgattatcgatttcctt
gccatgatgggcgacagctcggacaacattccgggcgtgccgggcgttggtgagaagacc
gcacaggcgctgctgcaaggcttgggcggtatgcagtcaatctatgacaatctcgataaa
gtggccgatctctcgttccgcggcgcgaaaaccatggcggcgaagctggagcaaaatcgc
gatgtcgctttcctgtcttatcggctggcaaccatcaaaaccgacgttgagttggatctg
acgtgcgatcagcttgtcgtcaatgaacccaatgtagaagcattgcaaaccttgtttagc
cggtatgaatttaagcgctggatcaccgatttacaggatggttcatggctgcaacaaggc
aaaaagagcaacgcgcaggctaagaaagcgcagctcagtgaacctgctgcgcccgctgcc
gaagcgaccagcgtgctctctgcagatggctacgtcactatcctcgatgaagcgacattt
gctgaatggctgaaaaagctgaaaagcgccgagctcttcgctttcgatcttgagaccgac
tcgttggataccttaagcgccaatattgtcggtattgggtttgccgtcgcgccgggtgaa
gcggcttatctgccggtcgctcacgattatctggatgcgccagatcagctggatcgtagc
gaagtactgaagcagctaaaaccgctgctggaagatggcaaagcggcgaaggttggccag
aatctcaaatacgatcgcggcgtgctgaagaactacgacattgaactgaacggcatcaaa
ttcgacaccatgctggaatcctattgcctgaacagcgtgggtggaaaacacgatatggat
agcctggccgcgcgctggctgaaccataaaacggtgactttcgaagagatcgcgggcaaa
ggcaaaaaccagctcacttttaaccaaattgctatcgagcaagccggtcactatgcggcg
gaagatgccgatgtcacgctgcaattgcatctgaaaatgtgggataagctggagccggaa
gcgggaccgaaacaggtatttgaagagatcgaaatgccgttgttgaaggtgatatcgcgt
attgagcgcaatggcgtgctgattgaccagaatatcctggcgaaacactcgcaggagctg
accacgcgtgtcgccgagctggagctgaaagcgcacgagcttgcgggcgaaccatttaac
ctctcttcacctaaacagctgcaaaccattctgtttgaaaagcagggaatcaagccaacc
aagaaaacgccgggcggcgcgccgtcgaccagcgaagaggtgttggctgagctggcgctc
gattatccattgccgaaagtgattcttgaacatcgtggtttatcaaagttgaaatcaact
tacaccgataagctgccactaatgatcaatccggttaccggccgcgtgcatacatcctat
catcaggcggtaaccgcgacaggacgactctcgtcaaccgatcccaatctgcagaatatc
ccggtgcgcaacgaagaagggcgccgtattcgtcaggcgtttatcgccgggccgggcaat
cgtattgttgctgcggactactcacagattgaactgcgcatcatggcgcatctgtcgcaa
gacaaaggcctgctggatgcgtttgcccagggcgaagatattcaccgcgccaccgcgtca
gaggtgtttggtgtggcgttgagcaaagtttctggtgagcagcgccgcagtgctaaggcg
atcaactttggcctgatctacggaatgagcgcatttggtctctcccgccagctgaatatc
ggcgcgggtgaggcgaaaaaatatatggatctctactttgaacgctacccgggcgtgctg
cgttatatggaagagacgcgcgcgaaggcggcagagaaaggctatgtagaaacgcttgat
ggtcgtcgcttgtggctacctgatatcacctccagcaatgccattcgtcgtaaagcggcg
gagcgtgcggcgatcaacgccccaatgcaaggcacggcggcagacatcatcaaacgcgcg
atgattgcggtggatggctggctgttagagcaaaaagacgatgctgtgcgcatgattatg
caggtacacgatgaactggtgtttgagatccgcagcgacgcgatagatggctcgattaag
accatccgtgacctgatggagaacagcatgaagctggatgtgccattgcaggttgaagtc
ggaaccggcaataactgggatgaggcgcattaa
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