Pantoea sp. SOD02: NR302_20140
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Entry
NR302_20140 CDS
T10895
Name
(GenBank) M20/M25/M40 family metallo-hydrolase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
panz Pantoea sp. SOD02
Pathway
panz00300
Lysine biosynthesis
panz01100
Metabolic pathways
panz01120
Microbial metabolism in diverse environments
panz01230
Biosynthesis of amino acids
Module
panz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NR302_20140
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
panz01002
]
NR302_20140
Enzymes [BR:
panz01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
NR302_20140
Peptidases and inhibitors [BR:
panz01002
]
Metallo peptidases
Family M20
NR302_20140
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
UVC31883
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Position
pSOD02:112508..113788
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AA seq
426 aa
AA seq
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MMQNSRFNSALAMIANDGAQMTDDLKQMLEVDTCFPPGNGYGAFADVMTHLLQPLDFRFA
RVSVPEHLWQAPDGSAYGERVNLLASLDAGAAENCNLYFHTDTVPAGDGWRFPALSLTAA
EGKLFGRGAADMKGTIVAAMAAVRAAQAAAIPLRFNPVFLLCTDEEGGLYPGIRYLAEQQ
LFSGHLLSFNGGAVPRIWAGCFGSIDLKVIITGRSAHSGDPVNGINAIEAALPLMNALYQ
LKLEVEQRTSAMPSPPHYHGKPLTSLLTLAAAQGGSKGSTIPERFELLINRRYAPEERFD
AVWQELTHCVESAMRGSPALDVTLQMIGHLAPVANPDGPHWPRWQAALSQGFGFQPSEFK
PWGSSTSSDMGWVQQAGIQEILLGGLARPDNRIHAADEYTTLADLIALSQSILAYLADDF
QPTQGS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaattcacgctttaacagtgcattagcgatgattgctaacgacggcgcgcaa
atgacggatgacctcaaacagatgctcgaggtcgatacctgcttcccgccgggcaacggt
tacggcgcatttgctgacgtgatgacgcatctgttgcagccgctggattttcgctttgcg
cgcgtctcggtgccggaacatttgtggcaggcaccggacggcagcgcgtacggtgaacgc
gtcaatctgctggcatcacttgatgccggtgcagctgaaaactgcaatctctatttccat
accgataccgtgcccgccggcgatggctggcgtttccctgcgctgtcgctgaccgcagca
gaaggcaagctgtttgggcgcggcgcggcagacatgaaaggcaccattgttgcggcgatg
gcggcggtacgcgcggcgcaggcggcggcgattccgctgcgttttaatccggtatttctg
ctttgcactgatgaagagggcggcttgtatcccggcatccgttatctggcggaacaacag
cttttctccggccatctgctcagcttcaacggtggcgcggtgccgcgtatctgggccggc
tgctttggcagcatcgatcttaaagtgattatcaccggacgttcggcgcactccggcgat
ccggttaacggcataaatgctatcgaagcggcgctgccgctgatgaacgcgctttaccag
ctgaagctcgaggtggaacaacgcacctcggcgatgccttctccgccgcattatcacggc
aaaccgctgacgtcactgttaacgctggccgccgcgcagggcggcagcaaaggctcgact
attcctgaacgttttgagctgctgattaatcgccgttatgcgccggaagagcgctttgac
gcggtgtggcaagagcttacgcactgtgtggaaagtgcgatgcgcggcagccccgcgctc
gatgtcacgctgcaaatgattggtcatctggcgccggtcgcaaatcctgacggcccacat
tggccgcgctggcaggcggcgctgagtcagggatttggcttccaacccagcgagttcaaa
ccctggggatcgtccaccagttccgatatgggctgggttcagcaagccgggattcaggag
attttactcggcgggctggcccgtccggacaatcgcattcatgccgccgatgagtacacc
acgctggcagatttgatcgcactttcgcagtccattctggcgtatctcgccgatgatttt
cagccaacccagggtagttaa
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