Pantoea sp. At-9b: Pat9b_0163
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Entry
Pat9b_0163 CDS
T01386
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pao
Pantoea sp. At-9b
Pathway
pao03420
Nucleotide excision repair
pao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pat9b_0163
03430 Mismatch repair
Pat9b_0163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pao03400
]
Pat9b_0163
Enzymes [BR:
pao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pat9b_0163
DNA repair and recombination proteins [BR:
pao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pat9b_0163
MMR (mismatch excision repair)
Other MMR factors
Pat9b_0163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
AAA_11
PhoH
Motif
Other DBs
NCBI-ProteinID:
ADU67489
LinkDB
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Position
190890..193052
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AA seq
720 aa
AA seq
DB search
MDVSDLLNGLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIDQLIGTSQGGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPARQGMWYINGKKDEGLRPKHIESYGNPVEQTWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFSNVLVDEFQDTNNIQYAWIRMLAGDT
GRVIIVGDDDQSIYGWRGAQVENIQRFLQDFPGAETIRLEQNYRSTNNILKAANALIANN
NGRLGKELWTDGSDGEPISLYCAFNELDEARFVVNRIKAWHENGNALADCAILYRSNAQS
RVLEEALLQGSMPYRIYGGMRFFERQEIKDALAYLRLMANRNDDAAFERVVNTPVRGVGD
RTLDVVRQTAREQQLTLWQATRELLQNRVLAGRAASALQRFCELVDSLASETAELPLHVQ
TDRVIKDSGLWLMYEQEKGEKGQARIENLEELVTATRQFSYQDEDEDLMPLQAFLSHAAL
EAGEGQADKWQDAVQLMTLHSAKGLEFSQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMEKLTLTYAETRRLYGKEVYHRPSRFIGELPEDCVEEVRLRASVSRPVSHQRMG
TPIAQNDSGFALGQRVRHAKFGEGTIINLEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgatctgcttaacggcttaaatgacaaacagcgcgaggcggtcgccgca
ccgcgcagcaacctgctggtgctggccggagcaggcagtggcaaaacccgtgtgctggtg
catcgcattgcctggctgctgtcggtggagaattgctcgccttattcgattatggcggtg
accttcaccaacaaagcggcggcggagatgcgtcatcgtatcgatcaattgatcggcacc
agccagggtggcatgtggatcgggacgttccatggcctggcgcaccgcttattacgcgcc
caccatcttgatgccgggctgccgcaggatttccagatcctcgacagcgaagatcaattg
cgcctgctgaagcgactgatcaaagcgatgaaccttgatgagaaacaatggcctgcgcgt
cagggcatgtggtacatcaacggcaagaaagacgaaggtctgcgtcctaaacatatcgaa
agctatggcaacccggtggaacaaacctggctgcgcatttatcaggcgtatcaggaagcc
tgcgatcgcgccggcctggtggattttgccgagctgctgctgcgtgcccacgaactgtgg
ctgaataaaccgcatatcctcaatcactatcgcgaacgtttcagcaacgtgctggtggac
gaatttcaggacaccaacaacatccagtacgcatggattcgtatgctggcaggtgatacc
gggcgagtgatcatcgtgggcgatgacgaccagtcgatctacggctggcgtggtgcgcag
gtggaaaatatccagcgctttttgcaggatttccccggggcggaaaccatccgcctggaa
caaaactaccgttccaccaataacatcctgaaagcggcgaacgccctgattgccaacaac
aatggtcgcctcggtaaagagttgtggaccgatggcagcgatggcgaaccgatctccctg
tactgcgcctttaacgagctggacgaagcgcgcttcgtggtaaaccgcatcaaagcctgg
catgagaacggtaatgcgctggcggactgcgcgattctgtatcgcagcaacgcccaatcg
cgtgtgctggaagaggcgctgctccagggcagcatgccgtaccgcatctatggtggcatg
cgcttcttcgaacgtcaggaaatcaaagatgcactggcgtatctgcgtctgatggcgaac
cgcaacgatgatgcggcgtttgaacgcgtggtgaataccccggtgcgcggcgtgggcgat
cgtacccttgacgtggtgcgtcagacggcgcgtgaacagcaactgaccttgtggcaggcg
acgcgtgaactgctgcaaaaccgggtgctggcggggcgtgccgcgtcggcgctgcaacgt
ttctgcgaattggtcgattcactggccagtgaaaccgccgagctgccgttgcacgtgcaa
accgaccgggtgatcaaggattccgggttgtggctgatgtacgagcaggagaagggcgaa
aaaggccaggcgcgtattgaaaaccttgaggaactggtaacggcaacgcgccagttcagc
taccaggatgaagacgaagatttgatgccgttgcaggcctttctctcccatgcggcactg
gaagcgggtgaaggccaggcggataaatggcaggatgcagtgcaattgatgacgctgcac
tcggcgaaaggtctggagtttagtcaggtgtttatcgtcgggatggaagaaggcatgttc
ccgagccagatgtcactcgacgaaggtggacgcctcgaagaggagcgtcgtctggcgtat
gtgggtgtgacgcgggcgatggaaaaactgacgctgacctatgccgaaacccgccgtctt
tatggtaaggaagtgtatcaccggccatcccgttttattggtgagctgccggaagattgc
gtggaagaagtgcgtttgcgtgccagcgtgagtcggccggtgagccatcagcgcatgggg
acgccgatcgcacaaaacgacagcggcttcgcgctgggtcaacgtgtacgccatgccaaa
ttcggcgaaggtaccattatcaacctcgaaggcagcggcgaacacagccgtttgcaggtg
gcttttcaggggcagggcatcaaatggctggtcgccgcctatgcccgcctggaaacggtg
tag
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