Pantoea sp. At-9b: Pat9b_0194
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Entry
Pat9b_0194 CDS
T01386
Name
(GenBank) fatty oxidation complex, alpha subunit FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pao
Pantoea sp. At-9b
Pathway
pao00071
Fatty acid degradation
pao00280
Valine, leucine and isoleucine degradation
pao00310
Lysine degradation
pao00362
Benzoate degradation
pao00380
Tryptophan metabolism
pao00410
beta-Alanine metabolism
pao00640
Propanoate metabolism
pao00650
Butanoate metabolism
pao00907
Pinene, camphor and geraniol degradation
pao00930
Caprolactam degradation
pao01100
Metabolic pathways
pao01110
Biosynthesis of secondary metabolites
pao01120
Microbial metabolism in diverse environments
pao01200
Carbon metabolism
pao01212
Fatty acid metabolism
Module
pao_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Pat9b_0194
00650 Butanoate metabolism
Pat9b_0194
09103 Lipid metabolism
00071 Fatty acid degradation
Pat9b_0194
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Pat9b_0194
00310 Lysine degradation
Pat9b_0194
00380 Tryptophan metabolism
Pat9b_0194
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Pat9b_0194
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Pat9b_0194
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Pat9b_0194
00930 Caprolactam degradation
Pat9b_0194
Enzymes [BR:
pao01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Pat9b_0194
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Pat9b_0194
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Pat9b_0194
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
Pat9b_0194
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
ADU67520
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All DBs
Position
complement(223595..225778)
Genome browser
AA seq
727 aa
AA seq
DB search
MLYQGDTLSVRWLDDGIAELVFDAPGSVNKLDTKTVASLGEALGVLEQQPALRGLLLTSA
KPAFIVGADITEFLSLFDAPVEKLSQWLAFANSIFNRLEDLPVPTVSAIDGYALGGGCEC
VLATDFRIATPQLRIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDVDGNSALK
LGLVDAVVSSDKLRSAALTVLQDAMVQGSWQARRAPKLAPLKLSPIEAAMSFTIAKSMVL
QTAGKHYPAPITAVKTIEAAAGLGRDDALQLETAAFVPLAQSDVARALVGIFLNDQYVKG
VAKKRGNATATPTQAAVLGAGIMGGGIAYQSAWKGVPVQMKDINPQALALGMKEASKLLN
KQLERGKIDGAKLASVLTTIQPTLDYAGFERADVVVEAVVENPQIKAKVLAETEQHLRDD
AILASNTSTIPISLLAQSLQRPENFCGMHFFNPVPRMPLVEVIRGEKTSEETLGKVVAWA
SKMGKTPIVVNDCPGFFVNRVLFPYFAAFSLLLRDGADFRQIDKVMEKQFGWPMGPAWLL
DVVGIDTAHHAQQVMAQGFPSRMQKDYRDAIDVLYEAGRYGQKNGLGFWRWTEDKKGKAQ
KQADTEVDTLLQHVCQPKRVFSDEEIANRMMLPMLNEVVRCLEEKIIASPAEADMALIYG
LGFPPFRGGACRYMDTLGNSTVVDQAKRYTVLGPLYALPELLLQKAHQHQSWYPAAQPID
EAALQSA
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgataccctttctgttcgctggctcgacgatggcatcgccgagctg
gttttcgacgcgcccggttcggtgaataaactcgataccaaaaccgttgcctcactgggt
gaggcgctgggtgtactggagcaacaacccgcgctgcgcggcctgctgctcacctcagcc
aagccggcgtttattgtcggggccgacatcaccgaatttctttccctgtttgatgcaccg
gtggagaaactgagccagtggctggccttcgccaacagtatttttaatcgtctggaagat
ctgcccgtccctactgtttccgctatcgatggttatgcgctgggcggcggctgtgagtgc
gtattggcaaccgacttccgcatcgcaacgccgcaactgcgtattggcctgccggaaacc
aaactgggcatcatgccgggcttcggcggcagtgtgcgtttaccacgcctgctgggtgcc
gacagcgcactggagattatcgccgcaggtaaagatgtcgatggcaacagcgccctgaaa
ctgggcctggtcgatgccgtcgtcagcagcgacaaactgcgcagcgcggcgttaaccgtg
ttacaggatgccatggtgcagggcagctggcaggcacgtcgcgctccgaaactggccccg
ctcaaactcagcccgattgaagcagcaatgagtttcaccatcgccaaaagtatggtgcta
caaacggcgggcaaacattacccggccccgatcactgcagtgaaaaccattgaagccgca
gcaggtctggggcgcgatgatgccttgcaactggagacggcggcgtttgtgccgttagcg
caaagtgatgtagcacgggcgctggttggtatcttccttaatgatcaatatgttaaaggc
gtggcgaaaaaacgcggcaatgccacagcgaccccaacgcaggcagcagtattgggggcg
ggcatcatgggcggcggtattgcgtatcagtcggcatggaaaggcgtgccggtgcagatg
aaagatatcaatccacaagcgctggcgctcggcatgaaagaagccagtaagctgctgaac
aagcaactggaacgcggcaaaattgatggcgcgaaactggccagcgtgctgaccaccatc
cagccaacgctggactacgccggatttgaacgtgcggatgtggtggtggaagcggtagtg
gaaaacccccagatcaaagccaaagtgctggccgaaaccgagcagcatctgcgcgacgac
gccatcctggcctccaacacctcgaccattccgatcagcctgctggcgcagtcgctgcaa
cgaccggaaaatttctgcggcatgcacttcttcaacccggtgccgcgtatgccgctggtt
gaagtgattcgcggcgaaaaaacgtccgaagaaacgctcggtaaagtcgtcgcctgggcc
agcaagatgggcaaaacgccgattgtggtcaatgactgccccggcttctttgttaaccgc
gtgctgttcccttacttcgcggccttcagcctgctgttacgtgacggtgccgatttccgc
cagatcgacaaagtgatggagaaacagtttggctggccgatgggaccggcatggttgctg
gatgtagtagggatcgataccgctcatcacgcccagcaggtgatggcacagggtttcccc
tcccggatgcagaaagattatcgcgacgccatcgacgtactgtacgaagccggacgctat
gggcagaaaaatggcctcggattctggcgctggaccgaagataaaaaaggtaaagcgcag
aaacaggccgataccgaagtggacacgctgctacagcacgtttgccagccgaagcgcgtc
ttcagcgatgaagagattgctaaccgcatgatgctgcccatgctgaacgaagtggtgcgc
tgtctggaagagaagattatcgcttccccggccgaagcggatatggcgctgatatacggc
ctcggcttcccgccgttccgtgggggtgcctgccgttatatggatacgctcggcaacagc
acagtggttgatcaggctaaacgctacaccgtgctcggtccgctgtatgcgctgccggag
ctgctgctacagaaagcccatcagcatcaaagctggtatcccgcagctcaaccgattgat
gaagccgcgctgcaaagtgcctga
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