Pantoea sp. At-9b: Pat9b_0399
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Entry
Pat9b_0399 CDS
T01386
Name
(GenBank) transcriptional regulator, LysR family
KO
K19338
LysR family transcriptional regulator, nitrogen assimilation regulatory protein
Organism
pao
Pantoea sp. At-9b
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pao03000
]
Pat9b_0399
Transcription factors [BR:
pao03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Pat9b_0399
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
ORF_2_N
HTH_5
DA_N
Motif
Other DBs
NCBI-ProteinID:
ADU67725
UniProt:
E6WID6
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All DBs
Position
complement(475473..476396)
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AA seq
307 aa
AA seq
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MNLRRLKYFVKIVDVGSLTQAADILHIAQPALSQQLATLEGEVNQQLLIRTKRGVTPTEA
GKTLYSHAQSILRQCEQAQSAIDRVGASLSGSVSVGLAPGTAAQNLALPLMMEVQQQHPG
IVLYFNENFGTTLSELIMNGRMDMAVIYDHRNIHGLRFMPLMKEDLCFVCPFSLAKPMKE
IRLAEVAQYDLFLPRIYNIMRKVLDDAFVQNNLQYRVKCEIESQTTLNAALTAGLGATIM
PESAARAMLKTSDSWMAKIVEPDVQASLSFCMSDHLPLSQPAEAVKSILLSLMSRRNVEN
HPLTLVG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttcgccgtcttaaatacttcgtcaagattgtcgatgtcggcagcctgacgcag
gccgccgatattttgcatatcgcccagcccgccctgagccagcaactggcgacgctggaa
ggggaagtaaaccagcaattgttgatccgcaccaagcgcggcgtcacccccactgaagcg
ggtaaaacgctctattcacatgcccagtccattttgcgccagtgtgaacaggcgcaaagt
gcgattgatcgtgtcggtgcgtcgctcagcggcagcgtctctgtcggtctggcaccgggc
acggcggcacaaaaccttgcactacccctgatgatggaagtgcagcagcaacatcccggc
attgtgctctatttcaatgagaactttggcaccacgttaagtgagctgatcatgaacggt
cgcatggatatggcggtgatctatgaccatcgcaatatccacggcctgcgctttatgccg
ctgatgaaggaagatttgtgcttcgtctgtccgttcagtctggcgaaaccgatgaaagag
atccggctggcagaagtggcgcagtacgatctgttcctgccacgcatttacaacatcatg
cgtaaggtgctggacgatgcctttgtacagaacaacctgcaatatcgcgtgaaatgcgag
atcgaatcacagaccacgctcaacgccgcactgacggccggtctgggtgccaccatcatg
ccggaatccgccgcgcgtgcgatgctgaaaacctcagactcctggatggcgaagattgtc
gagccggacgtgcaggcctcgctgtcgttctgcatgtcggatcacctgcccctgtcgcaa
ccggcagaagccgtgaaatcaatcctgttgtcactgatgtcgcgccgcaacgtggaaaac
catcccctgacgctggtgggataa
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