Pantoea sp. At-9b: Pat9b_0507
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Entry
Pat9b_0507 CDS
T01386
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
pao
Pantoea sp. At-9b
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pao03021
]
Pat9b_0507
03009 Ribosome biogenesis [BR:
pao03009
]
Pat9b_0507
Transcription machinery [BR:
pao03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Pat9b_0507
Ribosome biogenesis [BR:
pao03009
]
Prokaryotic type
rRNA transcription factors
Pat9b_0507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
S1
KH_2
KH_KhpA-B
FitA-like_RHH
Motif
Other DBs
NCBI-ProteinID:
ADU67832
UniProt:
E6WIP3
LinkDB
All DBs
Position
589902..591389
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AA seq
495 aa
AA seq
DB search
MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEIDVRVSIDRRSGDFDTFR
RWLIVDEVTQPTREITLEAARFEDEAFNLGDFVEDQIESVTFDRITTQTAKQVIVQKVRE
AERAMVVDQFREQEGDIITGVVKKVNRDNITLDLGSNAEAVIVREDMLPRENFRPGDRIR
GVLYAVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGEEVIEIKAAARDPGSRAKIAVKT
NDKRIDPVGACVGMRGARVQAVSSELGGERIDIVLWDDNPAQFVINAMAPADVASIVVDE
DNHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGWELNVMTVDDLQAKHQAEAHAAIDMFT
KHLDIDEEFATILVEEGFSSLEELAYVPINELLEIDGLDEDTVEALRERAKNALTTLALA
KEESRGNQEPAEDLLNLEGLDRALAYRLAAIGVCTLEDLAEQGVDDLTDIEGLDDEKAGA
LIMAARNICWFGDDA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagagatcttagctgtagtagaagccgtttctaacgaaaaagccctgccgcgt
gagaaaatcttcgaagcgctggagagcgctttggccactgcgaccaaaaagaagtatgaa
caggaaatcgacgtgcgtgtcagcattgaccgccgtagtggcgatttcgatactttccgt
cgctggctgattgttgatgaagtgacacagccgactcgtgagatcacgctggaagcagcc
cgcttcgaagatgaagcattcaatctgggcgattttgttgaagatcagattgaatcggtc
acctttgaccgtattaccacccagacggcgaagcaggttatcgtgcagaaagtgcgcgaa
gctgagcgcgccatggtggtcgatcagttccgcgagcaagaaggcgacatcatcacgggc
gtggtgaagaaagtgaaccgcgacaacatcacgctggacctcggcagcaatgctgaagcg
gtcattgtacgtgaagatatgctgccgcgtgaaaacttccgcccaggcgaccgtattcgc
ggtgtgctgtatgctgtgcgtccagaagcgcgtggtgcgcaactgtttgtgacccgctcg
aagccggaaatgctgatcgaactgttccgcatcgaagtaccagagattggtgaagaagtt
attgagatcaaagcggcagcgcgtgatcccggttctcgcgccaaaatcgcggtgaaaacc
aatgacaaacgtatcgatccggtgggtgcctgcgtaggtatgcgtggcgctcgtgtgcag
gctgtctccagcgaactgggtggcgagcgtatcgatatcgtgctgtgggacgacaacccg
gcgcagtttgtcattaacgctatggctccggctgatgtagcgtcaattgtggtggatgaa
gacaatcacaccatggatatcgctgttgaagctggcaatctggctcaggcgatcggccgt
aacggccaaaacgtgcgtctggcttcccagctgagcggttgggaactgaacgtaatgacc
gtcgatgacctgcaggcgaagcatcaggctgaagcccacgctgccatcgatatgttcacc
aaacatctcgacatcgacgaagagtttgccaccattctggtggaagagggcttctcttct
cttgaagagctggcatatgtaccgatcaacgagctgctggaaattgatggcctcgatgaa
gacacggtagaagccctgcgtgaacgagcaaaaaatgcgttaactaccctggcactggcg
aaagaagagagccgtggcaatcaggaacctgctgaggatcttctgaatctcgagggtctg
gatcgtgcgctggcttaccgtctggcagcgattggcgtttgcacgctggaagatcttgcc
gagcaaggtgtcgacgatctgacagatatcgaagggctggatgatgagaaagccggcgcg
ctgatcatggccgcgcgtaatatctgctggttcggcgatgacgcataa
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