Pantoea sp. At-9b: Pat9b_0639
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Entry
Pat9b_0639 CDS
T01386
Name
(GenBank) SNF2-related protein
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pao
Pantoea sp. At-9b
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pao03021
]
Pat9b_0639
Transcription machinery [BR:
pao03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Pat9b_0639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
ADU67964
UniProt:
E6W932
LinkDB
All DBs
Position
complement(742987..745893)
Genome browser
AA seq
968 aa
AA seq
DB search
MVFTLGQRWISDTESELGLGTVVALDTRMVTLMFPATGENRLYARNDSPVTRVIFNPGDT
VTSHEGWQMRVDDVRNENDLITYIGTRLDTEESNVLMREVMLDSKLVFSKPQDRLFAGQL
DRMDRFALRFRARKYQSEQYNLPTSGLRGMRTNLIPHQLHIAHDVGRRHAPRVLLADEVG
LGKTIEAGMIIQQQLLAGRAERVLIVVPETLQHQWLVEMLRRFNLRFALFDDDRYTEAQH
DSDNPFDTEQLIICSLDFVRRNKQRLELLADAAWDLLVVDEAHHLAWSEDAPSREYQVIE
QLAEQTPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFSQFVAEQQHYRPVADAVSTLL
ADKAISTDEMNLINDLVGEQDIEPLLQVANSDRDGKEDARKELISMLMDRHGTSRVLFRN
TRNGVKGFPKRELHQIRLPLPAQYQTAIKVSGIMGARKSAEERARDMLYPEQIYQEFEGD
SGTWWNFDPRVEWLMGYLTSNRKEKVLVICAKAATALQLEQVLREREGIRAAVFHEGLSI
IERDRAAAWFASEEDGAQVLLCSEIGSEGRNFQFASRLVMFDLPFNPDLLEQRIGRLDRI
GQMHDIQILVPWLEKTAQAVLLRWYHEGLDAFEHTCPTGRTIYDSVYSQLIEYLAAPENP
QGLDEFIAECRKQHDQLKAQLEQGRDRLLEQNSNGGEAAQALAEAIAEQDNDTGLVNFAL
NLFDIVGINQEDRSDNLIVLTPSDHMLVPDFPGLPEDGCTVTFNRNQALSREDTQFITWE
HPLIRNGLDLILSGDTGSCALSLLKNKALPVGTLLVEMIYVVEAQAPKHLQLTRFLPPTP
VRLLMDRSGNNLAGKVEFESFNRQLNAVNRHTGSKLVNAVQQDVHQILTLAESAVVPEAQ
AIIAAAKSEADEKLSAELSRLEALRAVNPNIRDDEVDALESNRSQVLASLGDAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggtttttacactgggtcaacgctggattagtgatacggaaagtgaactgggactgggc
acggtagttgcgctggatacgcgcatggtcacactgatgttcccggcaaccggcgaaaac
cgcctctatgcccgtaatgattctcctgttacccgcgtgatcttcaacccgggtgatacc
gtcaccagccatgaaggctggcagatgcgcgtcgacgacgtccgcaacgaaaacgattta
attacctacatcggtacgcgtctcgacaccgaagaatccaatgtgctgatgcgcgaagtg
atgctcgacagcaagctggtattcagcaaaccgcaggatcgcctgttcgccggacagttg
gatcgtatggaccgctttgcgttgcgtttccgcgcccgcaagtatcagagcgagcagtac
aacctgccaaccagcggtttacgcggcatgcgcaccaacctgattccgcatcagctccac
attgcgcacgatgttggccgtcgccatgccccgcgcgtgctgctggccgacgaagtcggc
ttgggtaaaaccatcgaagccgggatgatcatccagcaacagttactggccggccgtgcc
gagcgcgtgttgattgtggtgccggaaaccctgcaacatcagtggctggtggagatgctg
cgtcgcttcaatctgcgctttgcgttgtttgacgatgaccgctacaccgaagcgcagcac
gacagcgataatccgttcgataccgaacagctgattatctgctcgctggattttgtccgt
cgtaacaagcagcgtctggaactgctggccgatgccgcatgggacttgctggtggtcgac
gaagcgcatcacctggcgtggagtgaagacgcaccaagccgtgaatatcaggtaattgag
caactggcggaacagacgcctggcgtgctgctgttgaccgccacgccggaacagctcggc
atggagagccatttcgcccgtctgcgcctgctcgatccaaaccgcttccacgatttcagc
cagttcgttgccgagcagcagcactatcgcccggtggccgatgcggtcagcacgctgctg
gccgacaaagcgatctccacagatgaaatgaacctgatcaacgacctggtcggtgagcag
gacatcgagccgctgttgcaggtggcaaacagcgatcgcgacggcaaagaagatgcacgt
aaagaactgatttctatgttgatggatcgccacggcaccagccgcgtgctgttccgcaac
acccgtaacggcgtgaaaggtttcccgaaacgcgaactgcatcagatccgcctgccgttg
cccgcacagtaccagacggcgattaaggtatccggcattatgggtgcgcgtaaaagtgca
gaagaacgcgcccgtgacatgctgtacccggaacaaatttatcaggaatttgaaggcgat
agcggcacctggtggaacttcgatccgcgcgttgaatggctgatgggctaccttaccagc
aaccgcaaagagaaagtgctggtgatttgcgccaaagccgccaccgcgctgcaactggag
caggtactgcgcgaacgtgaaggcatccgcgcggcggtgttccatgaaggtctgtcgatc
atcgaacgtgaccgtgctgccgcctggttcgcctcagaagaagatggcgcgcaggtgctg
ctgtgctcagaaatcggttctgaaggccgcaacttccagttcgccagccgcctggtgatg
tttgatctgccgttcaacccggacctgctggagcagcgtattggccgtctcgatcgtatc
ggtcaaatgcacgacatccagattctggtgccgtggctggaaaaaaccgctcaggcggtg
ctgttgcgctggtaccacgagggtctggacgcgtttgaacacacctgccccaccggccgt
accatttacgacagcgtctatagccagctgattgagtacctggccgcaccggaaaacccg
cagggactggacgagtttattgcggagtgccgcaaacagcatgaccagttgaaagcccaa
ctggaacagggacgcgaccgtctgctggagcagaattctaacggcggtgaagccgcccaa
gcgctggccgaagccattgccgagcaggataacgataccggtctggtgaattttgctctc
aacctgtttgatatcgtcggtatcaaccaggaagaccgcagcgataacctgatcgtgctg
acaccgtccgatcatatgctggtgccggatttccctggcctgccggaagatggctgtacc
gtgaccttcaaccgtaaccaggcgctgtctcgtgaagatacccagttcattacctgggag
cacccgctgatccgcaacggtctggatctgatcctctccggcgataccggtagctgtgcc
ctgtcgttgttgaaaaacaaagcgttaccggttggcacgctgctggtcgagatgatctac
gtggtggaagcacaggcaccgaagcacctgcaactgacccgtttcctgccgccgacgccg
gtgcgtttgctgatggatcgtagcggcaacaatctggccggaaaagtggagtttgagagc
ttcaaccgtcagctgaacgcggtgaatcgtcacaccggtagcaagctggtgaacgccgtc
cagcaggatgtgcatcagattctgaccctggccgaaagcgccgtggtgccggaagcgcag
gcgattatcgcggcagcaaaatccgaagcggatgaaaagctgagtgcggaattatcacgt
cttgaagcactgcgtgccgtcaaccccaacatccgtgatgacgaggttgacgcgctggag
agcaaccgtagccaggtgctggcaagcctcggtgacgctggctggcgtcttgatgcgctg
cgcctgatcgtggtgacgcaccaataa
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