Pantoea sp. At-9b: Pat9b_0785
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Entry
Pat9b_0785 CDS
T01386
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pao
Pantoea sp. At-9b
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pao01011
]
Pat9b_0785
Enzymes [BR:
pao01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Pat9b_0785
Peptidoglycan biosynthesis and degradation proteins [BR:
pao01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Pat9b_0785
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Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
LysM_RLK
LysM2_CERK1_LYK3_4_5
LysM_OapA
NMB0315_dom_I
DUF3071
Motif
Other DBs
NCBI-ProteinID:
ADU68109
UniProt:
E6W9A2
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Position
complement(917567..918949)
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AA seq
460 aa
AA seq
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MKAKAILIASVLLVGGCQASRNDATIPQQHAQSLSSAGQGENGKYGDRLLSPRWQDDGTS
LAEDTDLWNHISDELKMGIPDNSRIREQKTKYLKNKSYLHDVTLRAEPYMYWIVEQIQKR
KMPMELVLLPIVESAFDPHATSSANAAGIWQIVATTGKNYGLKQNQWYDGRRDVVASTKV
ALDMMQRLNTMFDGDWLLTVAAYNSGEGRVLKAIKQNKARGKPTDFWSLSLPRETAVYVP
KMLALSDILKNNKRYGIKLPTPNESRALARVEVGQQIELTQAADMAGMSLSKLKSFNAGY
KHGSTAPNGPHYIMVPKSNVAQLRNSLASGDIAAVQPSQLAKAGDAGSSYTVRKGDTLSG
IASKLGVSINTLKQQNNLRGASVRIGQKLTIGDKGSQLADNGNSITYRVRKGDSLASIAR
RHGVNIQDVMRWNSVLSDAKNIQPGDNLTLFVHNSATPDT
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaaaagcgatattaatcgcctctgtcttgctggtgggaggttgtcaggcatca
aggaatgacgccactatcccgcaacagcatgctcagagcctgtcttcagctggtcaaggt
gaaaatggaaagtacggagatcgcttgttgtcgccgcgctggcaagatgatggaacaagc
ctcgcagaagacactgatctctggaatcacattagtgacgagttgaagatggggattccg
gataactcccggatccgcgaacaaaaaacaaagtacttaaaaaataagagctatctccac
gatgtaacattacgggcagagccgtacatgtactggatagtcgagcagatacagaaacgt
aagatgccgatggaactagtactgctacccatagtggagagcgcttttgacccacatgca
acatcttctgcgaatgccgcaggcatctggcagattgttgcaacaacgggcaaaaactat
ggtttgaaacaaaaccagtggtatgacggtcgccgggatgtggtggcgtctaccaaggtt
gcgctggatatgatgcagcgtctcaacaccatgtttgacggtgactggttactgaccgtt
gccgcttataacagtggtgaaggacgtgtgttgaaagcgattaaacagaataaggcgcgc
ggtaagccgaccgatttctggagtttatcgctgccacgcgaaaccgcggtttatgttccg
aaaatgttggccttgagcgatattctcaagaacaacaagcgctacggcatcaaattgccg
accccgaacgagagccgtgcactggctcgtgttgaagtgggtcagcagattgagctgacg
caggccgcagatatggctggcatgtcgttaagtaagctgaaaagcttcaatgctggttat
aaacacggcagcacagcgccgaatggaccgcactacattatggtgcctaagtccaacgtt
gctcagctccgcaattcactggcctccggtgatattgccgccgtgcagccttctcaactg
gcaaaagccggtgatgcgggaagcagctacacggttcgcaaaggcgacaccttgtctggc
attgccagcaagctcggcgtgagcattaatacactgaagcagcagaataacctgcgcggt
gcctcggttcgaatcggtcagaaactgaccatcggcgataaaggctcgcagctggccgat
aacggcaacagcatcacctatcgtgttcgtaagggtgattctcttgccagtatcgcgcga
cgtcatggagttaacattcaggacgttatgcgctggaacagtgtattaagtgatgcgaaa
aacattcagccgggtgataacctcacgctgtttgttcataatagcgcaacgccagacacc
taa
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