Pantoea sp. At-9b: Pat9b_0871
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Entry
Pat9b_0871 CDS
T01386
Name
(GenBank) glycoside hydrolase family 2 TIM barrel
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
pao
Pantoea sp. At-9b
Pathway
pao00052
Galactose metabolism
pao00511
Other glycan degradation
pao00600
Sphingolipid metabolism
pao01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Pat9b_0871
09103 Lipid metabolism
00600 Sphingolipid metabolism
Pat9b_0871
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Pat9b_0871
Enzymes [BR:
pao01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
Pat9b_0871
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro_2_N
Bgal_small_N
LacZ_4
Glyco_hydro_2
Glyco_hydro_2_N2
Motif
Other DBs
NCBI-ProteinID:
ADU68195
UniProt:
E6WAS0
LinkDB
All DBs
Position
complement(1001692..1004760)
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AA seq
1022 aa
AA seq
DB search
MTSVSVSLSEILARRDWENPVITSLNRLDAHPPFASWRDEQAARDDRPSPSRRSLNGQWT
FSYFAQPEAVPQSWLLQDLPDAGSLPVPANWQLHGYDAPIYTNVQYPIPVNPPWVPSNNP
TGCYSLTFNVDATWLQQGQTRIIFDGVNSAFFLWCNGQWIGYSQDSRLPAEFDLSSVLQA
GSNRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQLADVQIETVLSPEYIRAD
LRVSITIQQLKPCRLRLRLWQGETLIGEHEQAPGSAIIDERGHYPERALLVLPVNQPKLW
SAETPHLYRAVVSLLDDQGNLLEAEAYDVGFRRVAIENGLLCLNGQPLLIRGVNRHEHHP
EKGQVVDEASMRRDIELMKRHNFNAVRCAHYPNHPLWYRLCDEYGLYVVDEANIETHGMQ
PMNRLSDDPRWFAAYSERVTRMVQRDRNHPCIIIWSLGNESGHGSTHDALYRWVKSSDPS
RPVQYEGGGANSAATDIVCPMYARVDQDQPFPAVPKWSLKKWIGLPGETRPLILCEYAHA
MGNSFGGFAKYWQAFRQFPRLQGGFVWDWVDQSLTRYDSQGEAWQAYGGDFGDTPNDRQF
CMNGLVFADRTPHPALFEAQRAQQFFTFTADAQDPWRFTVSSDYLFRHSDNEVLRWSVEQ
EGDVVAQGELALDIAPRASQTFTLPQVEGLQGNCWLNLAVHQPHATRWSEADARVAWHQW
PLPAAQPTNSPGQTEAAPQVESNHDLIAVCLPHQRWHFSRRSGELVQWFVNDEETLLTPL
QECFIRAPIDNDIGTSEAANVDPNAWVERWKRAGYDQLEPQLMAMEIDSLKHSVLIETRH
QWHAAGQVIFTSRKRYQIRGNGEVSLDIDVEQTAGLPPPARIGLRAQLAHAPQQVSWLGL
GPHENYPDRQLAAQFSRWRQPLSSMRTEYVFPGENGLRSGTRQLDTGSWQVSGDFAFSLS
QHSLEQLRATSHRHLLQPEAGCWLHLDGFHMGVGGDDSWSPSVSPEFLLSQQRWHFSLTL
RQ
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgacatctgtctctgtttccctcagcgaaatcctggcgcgacgcgactgggaaaacccg
gtaattaccagcctgaaccgactcgatgcgcatcccccctttgccagttggcgcgatgag
caggcggcacgtgacgatcgtccttcgccgtcccgtcgcagcctgaatggccaatggacg
ttcagctattttgcccagccggaagcagtgccacaaagctggctgttacaggatctgcca
gatgccgggagcttaccagtacctgcaaactggcaactacacggctatgatgccccgatc
tacactaacgtgcagtaccctatcccggttaacccaccgtgggttccgagcaacaatcca
accggatgttactcgctcacattcaatgttgacgctacctggctgcaacagggccagacg
cgcattatctttgatggcgtgaactccgccttctttctgtggtgcaacggtcaatggatt
ggttattcgcaggacagccgcttacctgccgaattcgatctcagtagcgtgttgcaggca
ggcagtaaccgtctggcggtcatggtgctgcgctggagcgatggcagttacctggaagat
caggatatgtggcgcatgagcggtatttttcgcgatgtctccctgctgcataaacccacg
acacaactggctgacgtgcaaattgaaacggtgctcagcccggaatatatccgtgccgac
ttgcgggtcagcataacgatccagcaactcaaaccctgtcgtctgcgtctacgcctgtgg
caaggggaaacgctgatcggcgaacacgaacaagcccccggcagcgccattattgacgaa
cgcggtcactacccggaacgcgcattgctggtattgccggtcaaccaacccaaactgtgg
agcgccgaaacaccccatctgtaccgtgcggtggtttctctgctcgatgatcaaggcaac
ctgctggaggcggaagcttacgatgtcggtttccgtcgggtagcgattgaaaatggcctg
ctgtgtctgaatggtcagccgctgctgattcgcggtgtgaaccgccacgaacatcatccg
gaaaagggccaggtggtggatgaggccagcatgcggcgcgatattgagttgatgaaacgc
cataacttcaacgcagtgcgctgtgcgcattatccaaatcatccattgtggtatcgcctg
tgcgatgagtatggtttgtacgtggtggatgaggcgaatatcgaaacccacggcatgcag
ccgatgaatcgcctttctgatgacccgcgctggtttgccgcttacagcgaacgcgtcacc
cgcatggtgcagcgcgatcgcaatcacccctgcattattatctggtcattgggcaatgag
tctggtcatggcagcacccacgatgcattgtaccgatgggtgaaaagcagcgatcccagt
cgcccggtgcaatatgaaggcggcggagccaatagcgccgcaaccgatattgtttgcccg
atgtatgcccgcgtcgatcaggatcagcccttcccggcggtgcccaaatggtcactgaag
aagtggatcggcctgcccggcgaaacccgcccgctgatcttgtgcgaatatgctcatgcg
atgggcaacagctttggcggcttcgccaaatactggcaggctttccgccagtttccacgt
ttacagggcggtttcgtctgggattgggtggatcaaagtctgacgcgttatgactcgcaa
ggcgaggcatggcaagcctatggtggggacttcggcgacacgccgaatgaccgccagttc
tgcatgaacggcctggtgtttgccgatcgcacaccacatccggcactgttcgaagctcag
cgggcgcagcagtttttcacgttcaccgcggatgcacaggacccctggcggtttaccgtc
agcagcgattacctgtttcgccatagcgataacgaagtgctgcgctggtcggttgaacaa
gagggcgacgttgtggcccagggtgaactggcgctcgatatcgcaccccgcgccagtcag
acatttacgctgccacaggttgaaggattacaaggcaactgctggcttaatctggcagtg
caccaaccgcacgcgacccgctggtcagaagccgatgcacgtgtcgcctggcatcaatgg
ccgctgcctgctgcgcaaccgacaaattcaccggggcagacagaagcggccccgcaggtt
gagtcgaatcatgatttgatcgctgtttgtctgccacaccagcgctggcatttttcccgt
cgcagcggcgagctggtgcagtggttcgtgaatgacgaggaaaccctgctgacgccgctc
caggagtgtttcatccgcgcaccgattgataacgacatcggcaccagcgaagccgccaac
gttgatccgaatgcctgggtcgagcgctggaaacgcgcgggttatgatcagcttgagccg
cagttaatggcgatggaaattgacagcctgaagcatagcgtgctgattgaaacgcggcat
cagtggcatgctgccgggcaggtgatctttaccagccgcaagcgttatcagattcgcggt
aatggtgaagtctccctcgatatcgatgtcgaacagacggcaggcttgccaccaccggca
cgtattggcttgcgcgcgcagctggctcatgccccgcagcaggtcagttggttgggactg
gggccacatgaaaactatcccgaccgccaactggccgcacaattctcccgctggcggcag
ccgctaagcagcatgcgcaccgaatatgtttttccgggggaaaatggtctgcgtagcggg
acacgccagcttgataccggaagctggcaggtaagcggtgatttcgccttctcgctgagt
cagcacagcctggagcaactgcgcgccacctcgcatcgccacctgttgcagccagaagcg
ggttgctggctgcatctcgatggcttccatatgggggtcggcggggatgattcctggagt
ccgagcgtcagcccggagtttttgctttctcagcagcgctggcacttctccctgacgctg
cgtcagtaa
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