Pantoea sp. At-9b: Pat9b_0889
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Entry
Pat9b_0889 CDS
T01386
Name
(GenBank) putative exonuclease RdgC
KO
K03554
recombination associated protein RdgC
Organism
pao
Pantoea sp. At-9b
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pao03400
]
Pat9b_0889
DNA repair and recombination proteins [BR:
pao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Pat9b_0889
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RdgC
Motif
Other DBs
NCBI-ProteinID:
ADU68213
UniProt:
E6W7V1
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All DBs
Position
complement(1017984..1018895)
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AA seq
303 aa
AA seq
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MLWFKNMMVYRLNRDIPLSADDLEKQLDAFTFSPCGSQDMAKTGWVSPMGNRSEALTHVV
NGQIVICARTEQKILPSPVVKQALEAKIDKLEAEQSRKLKKTEKDSLKDEVLHSLLPRAF
SRFSQTFMWIDTVNNLIIVDCASAKKAEDTLALLRKSLGSLPVVPLTLESPIELTLTEWV
RSGQLPAGFTLMDEAELKALLEEGGVIRCKKQDLVSDEIATHIEAGKVVTKLALDWQERI
QFVIADDASVKRLKFSDTLREQNDDIDRDDFAQRFDADFILMTSELAALISNLVEALGGE
AQR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggtttaaaaatatgatggtttatcgtctgaatcgtgacattccgctgtccgca
gacgatctggaaaaacagctcgatgccttcaccttctcaccctgcggtagccaggatatg
gcgaaaaccggttgggtttcccctatgggtaaccgcagcgaggcgctgacgcacgtggtt
aatggtcagattgtgatctgtgcccgtaccgagcaaaaaattctgccttctccggtggtc
aaacaggcgctggaagccaaaatcgacaagctggaagcggaacaaagccgcaagctgaag
aagacggaaaaggactcgttaaaagacgaagtactgcacagtttgctgccgcgagccttt
agccgtttcagccagacctttatgtggatcgacaccgtcaacaacctgattatcgttgac
tgcgccagtgcgaaaaaagccgaagatacgctggcgctgttacgcaaaagcctcggttca
ctgccggtggtgccgttgacgctggaaagcccgattgaactgacgctgaccgagtgggtg
cgttcaggccagctgccagccggcttcaccctgatggatgaagccgagctgaaagcgcta
ctggaagaaggtggcgtgatccgctgtaaaaagcaggacctggtgtcggacgaaattgct
acccatatcgaagccggtaaagtcgtgaccaaactggcgctcgactggcaggagcgcatt
cagtttgttatcgctgatgacgcttcagtgaagcgcctgaaattcagcgataccctgcgt
gagcaaaatgacgatatcgatcgtgatgattttgctcagcgtttcgatgctgattttatc
ctgatgaccagtgaactggctgcgctgatcagcaatctggtggaagcactgggcggagaa
gcacagcgttaa
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