Pantoea sp. At-9b: Pat9b_0899
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Entry
Pat9b_0899 CDS
T01386
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pao
Pantoea sp. At-9b
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pao03400
]
Pat9b_0899
DNA repair and recombination proteins [BR:
pao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pat9b_0899
Archaeal homologous recombinant proteins
Pat9b_0899
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
ADU68223
UniProt:
E6W7W1
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Position
complement(1029740..1030957)
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AA seq
405 aa
AA seq
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MRIIHTADWHLGQFFYSKSRAAEHQAFLDWLRQQIEQHQVDALIIAGDLFDTGSPPSYAR
EMFNRFVVALQASQCQLIVLAGNHDSVATLNESRELLACLNTQVITSATPQGEQQVLTLK
QRDGTPGALLCAIPYLRPRDILRSQAGQSGREKQQSLLEAIEQHYQHCFAAAEAQRAALG
GQLPIIATGHLTTVGVTKSDSVRDIYIGTLDAFPAQAFPAADYIALGHIHRAQRIADSDH
IRYSGSPIPLSFDELGRDKSVFLLDFSTGLDAVTPLTIPLFQPMQMLKGSLAAIEQQLAA
FQDNAASLPAWLDIEITTQEHLSDLQRRVEQLTENLPVEVLLVRRSREQRSRSLARLDNE
TLSELQVEEVFARRLAQEDDLDDEQAARLTELFRTTLAALENPAA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcattcatacggcggactggcatctgggccagttcttttacagcaaaagtcgc
gcagctgaacatcaggcgtttctcgactggctgcgtcagcaaattgaacaacatcaggtg
gatgcgctgattatcgccggtgacctgttcgacaccggctcgccacccagctatgcccgt
gaaatgttcaaccgctttgtggtggcgttacaggccagccagtgccagttgattgtgctg
gccggcaaccatgattcggtggcgacattaaatgaatctcgcgagttgctcgcctgcctc
aatactcaggtgatcaccagcgcgacgccacaaggcgagcaacaggtgttgaccctgaaa
cagcgcgacggtacgccaggcgcgctgctgtgcgccattccttacctgcgtccgcgcgat
attctgcgcagccaggctggacagtccggtcgggagaaacaacagtcgttgctggaagcc
atcgaacagcattatcagcactgctttgccgccgccgaggcgcaacgcgcggcactcgga
ggccaactgccgattatcgccacgggccatctcaccactgtcggcgtcaccaaaagcgac
tcggtgcgtgatatctacatcggtacgctcgacgccttcccggcgcaggcgtttcccgcc
gccgactatatcgcccttggccatattcaccgtgcgcagcgcattgctgacagcgaccat
attcgctacagcggttcgcccatcccgctcagctttgatgaactgggccgtgataaaagc
gtgtttctgctcgatttcagcaccggtctggatgcggtgacgccgctgacgatcccgctg
ttccagccaatgcagatgctgaaaggctcgctggctgctatcgaacaacaactggccgcg
ttccaagataacgccgcatcgctgccagcgtggctggatattgaaatcaccacccaggaa
catctcagcgatttgcagcgccgcgtggagcaactgacggaaaatttaccggtcgaggta
ctgctggtacgccgtagccgtgagcaacgcagccgcagcctggcacgactggataacgaa
accctgagcgaattgcaggttgaggaggtgtttgcgcgtcgcctggcgcaggaagacgat
ctggatgacgaacaggcggcccggctcaccgagctgtttcgtaccacccttgccgcgctg
gagaaccctgctgcatga
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