Pantoea sp. At-9b: Pat9b_0925
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Entry
Pat9b_0925 CDS
T01386
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pao
Pantoea sp. At-9b
Pathway
pao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Pat9b_0925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pao03400
]
Pat9b_0925
Enzymes [BR:
pao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Pat9b_0925
DNA repair and recombination proteins [BR:
pao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Pat9b_0925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
KxDL
DUF6687
SH3BP5
Motif
Other DBs
NCBI-ProteinID:
ADU68249
UniProt:
E6W7Y7
LinkDB
All DBs
Position
complement(1058140..1058382)
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AA seq
80 aa
AA seq
DB search
MPKKAEAPASFESALQQLEQIVSRLESGELPLEEALKEFERGVQLARSGQQTLQQAEQRV
QILLSDDKDAALTPFTPEDN
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaaaagccgaagcgcccgccagttttgaaagcgcactacagcaactggagcag
atcgtcagccgcctggaaagtggtgagctgccgctggaagaagcgctaaaagaatttgaa
cgcggtgttcaactggcacgtagcggtcagcaaaccctgcaacaggcggaacaacgcgta
cagattttgctgagcgacgataaagacgctgcgcttaccccttttaccccggaagataac
tga
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