Pantoea sp. At-9b: Pat9b_0946
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Entry
Pat9b_0946 CDS
T01386
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pao
Pantoea sp. At-9b
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pao03032
]
Pat9b_0946
03036 Chromosome and associated proteins [BR:
pao03036
]
Pat9b_0946
03400 DNA repair and recombination proteins [BR:
pao03400
]
Pat9b_0946
DNA replication proteins [BR:
pao03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Pat9b_0946
Chromosome and associated proteins [BR:
pao03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Pat9b_0946
DNA repair and recombination proteins [BR:
pao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Pat9b_0946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
ADU68270
UniProt:
E6W808
LinkDB
All DBs
Position
1083069..1083350
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AA seq
93 aa
AA seq
DB search
MNRVNKSQLIDKIAADADISKAAAGRVLDAFMGSVSDALKGGDEVALVGFGTFSVRERAA
RTGRNPQTGKEITIPAGKVPGFRAGKALKDAVN
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaatagagtgaataagtcacagttgatcgacaaaattgctgcagatgcggatatttct
aaggcagcagcgggacgtgtattagatgcattcatgggttccgtttctgacgcgctgaaa
ggcggtgatgaagtggcactggttggtttcggtactttctctgttcgtgagcgtgctgct
cgcacaggccgtaacccgcaaaccggtaaagagatcaccattccggctggtaaagtgccg
ggcttccgcgcgggtaaagcgctgaaagacgctgtcaattaa
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