Pantoea sp. At-9b: Pat9b_1086
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Entry
Pat9b_1086 CDS
T01386
Name
(GenBank) ROK family protein
KO
K02565
N-acetylglucosamine repressor
Organism
pao
Pantoea sp. At-9b
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pao03000
]
Pat9b_1086
Transcription factors [BR:
pao03000
]
Prokaryotic type
Other transcription factors
Others
Pat9b_1086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ROK
MarR
HTH_24
Fe_dep_repress
MarR_2
SMC_ScpB
HTH_Crp_2
HTH_IclR
DUF6820
TrmB
Motif
Other DBs
NCBI-ProteinID:
ADU68408
UniProt:
E6WAY5
LinkDB
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Position
complement(1225576..1226796)
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AA seq
406 aa
AA seq
DB search
MTTGGQTQIGNVDLVKQLNSAAVYRLIDQQGPISRIQIAEVSQLAPASVTKITRQLIERG
LIKEVEQQASTGGRRAISIITETRHFHTIGVRLGRNDATLTLFDLSGKSLAQEDYPLPER
TQETLENALFNAISAFMAAHQRKIHELIAIAVILPGLVDPINGVIRYMPHIAVSHWPLVS
SLQKRFNVTSFVGHDIRSLALAEHYFGASRDCADSILVRLHRGTGAGIIANGHIFLGSNG
NVGEIGHIQVDPLGERCHCGNFGCLETIAANGAIENRVRHLLNQGYPSSLTLNDCQMPQI
CRAANQGDALACEVIEYVGRYLGKAIAIAINLFNPQKVVLAGEITDADKVLFPAIEGCIN
TQALNAFRKNLPVVRSELDHRSAIGAFALAKRAMLNGILLQHLLEE
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaccactggcggccagactcaaataggaaatgtcgatcttgtcaagcaactcaatagc
gcagccgtttatcggttgattgatcaacaagggcctatttcgcgcattcagattgccgaa
gtgagtcaacttgcgcccgccagcgtcaccaaaattacccgccagttgattgagcgcggt
ctgatcaaagaggtggagcaacaagcctccaccggcggtcgccgcgccatctccatcatc
accgaaacccgccattttcataccatcggcgtgcgcctcggacgtaacgatgccacgctg
acactgtttgatctcagtggcaaatccctggcgcaggaagactacccgctaccggaacgc
acccaggaaacactggaaaatgccttattcaacgccatcagcgcgtttatggctgcccac
cagcgtaaaattcatgaactgattgcgattgccgtgattttgccgggattggtagacccc
attaacggcgtgattcgctatatgccgcatattgctgtcagccactggccgctggtttcc
agcctgcaaaaacggttcaatgtcaccagttttgtcggccatgatatccgtagtctggcc
cttgccgagcactacttcggtgcaagccgtgactgcgcagactccattctggtgcgcctg
catcgtggaaccggggccggtatcattgccaacgggcacatttttctcggcagcaatggc
aacgtgggcgaaattggtcatattcaggtcgacccgctgggcgaacgctgccattgcggc
aacttcggctgtctggaaaccattgccgccaatggcgccattgaaaaccgggtacgccac
ctgctgaatcagggctaccccagctcactgaccctcaatgattgccagatgccgcaaatc
tgccgcgcggccaatcagggcgatgcgctggcgtgcgaagtgatcgaatatgtcggccgt
tatctcggaaaagctatcgccattgcgattaacctgtttaatccgcagaaagtggtgttg
gccggtgaaatcaccgacgccgacaaggtgctgtttccggcgattgaaggctgcatcaat
acgcaggcactcaatgcgtttcgtaaaaatctgcctgtggtacgctcagagttggatcat
cgctctgccattggcgcttttgcgctggcaaaacgcgcgatgctgaatggcattctgctg
caacatctgctggaagagtaa
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