Pantoea sp. At-9b: Pat9b_1101
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Entry
Pat9b_1101 CDS
T01386
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pao
Pantoea sp. At-9b
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pao03400
]
Pat9b_1101
Enzymes [BR:
pao01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Pat9b_1101
DNA repair and recombination proteins [BR:
pao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Pat9b_1101
Prokaryotic type
Pat9b_1101
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ADU68423
UniProt:
E6WC07
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All DBs
Position
1241211..1242638
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AA seq
475 aa
AA seq
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MTTHLVWLRNDLRINDNSALHAACRDPGARVLALFIATPGQWQQHHMAPKQAAFIYQSLC
LLQAALAERGIPLHYQQCDDFAASLEVLADFCQQQQVDQLFYNYQYEINERQRDAAAEKR
LDDQGVICQGFDDSLLLAPGSVQTGNHTMFKVFTPFSKAFVRRLHQGLPECHMAPRARQG
APINVEKKIPPFDYPMEDFDVTLFPAGEEAALQQLRHFAQQSVVDYAAERDKPAVDGTSR
LSVYLATGVLSPRQCLHRILKQHPDALDGGLAFVWLNELIWREFYRHLMVAFPALCKHQP
FVGWTRHVRWQKNQRHLTAWQQGKTGYPIVDAAMRQLNALGWMHNRLRMIVACFLVKDLL
IDWHDGERYFMQQLMDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDPQGAFIR
QWLPELAVVPDAHIHQPHVWAQKNNMTLAYPAPIVEHKDARKKTLDAFERARSAA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccatctcgtctggctgcgcaatgatttacgtatcaatgacaacagcgcattg
catgccgcctgtcgcgaccctggtgcgcgcgtgctggcgctgtttatcgccacgcccggc
cagtggcagcaacatcatatggcacccaaacaggccgcgtttatttatcagagcctgtgt
ctgttgcaggccgcgctggcggagcggggcattccgctgcattaccagcagtgcgacgac
ttcgccgcgtcactggaggtgctggcggatttttgccagcagcagcaggtggatcagctg
ttttacaactaccaatacgaaatcaatgaacgtcagcgcgatgccgcggcagaaaagcgc
cttgatgatcagggggtgatttgccagggctttgatgacagcctgctgttagcgccgggt
agtgtgcaaacgggcaaccacaccatgttcaaggtgtttacgccgttcagtaaggccttt
gtccgtcgtctgcatcagggactgcctgagtgccatatggccccgcgtgcccgccagggt
gcgccgattaacgtcgagaaaaaaatcccgccttttgactatccgatggaggatttcgac
gtcacgctgtttcccgccggcgaagaggccgcattgcaacagctgcgccatttcgcgcag
caatccgtggtggattatgccgctgaacgcgataaacccgccgtggatggcaccagccgg
ttgtcggtgtacctggcgaccggcgtattgtcgccacgtcagtgcctgcatcgcatcctc
aaacagcacccggatgcactggatggcggcctggcatttgtctggctgaacgaattgatc
tggcgtgagttctatcgtcatctgatggtggcgtttcccgccttgtgcaagcatcagccg
tttgtcggctggacgcgccatgtgcgttggcagaagaatcaacggcatctcactgcctgg
cagcagggcaaaaccggctatccgattgtggacgcggcgatgcgtcaactgaatgcgttg
ggctggatgcataatcgtttacgcatgattgtcgcctgttttctggtgaaagatttgctg
atcgactggcatgacggggaacgctatttcatgcagcagctgatggatggtgacctcgcg
gccaataacgggggatggcagtgggcggcctctaccggtaccgatgcggcaccctatttt
cgcatctttaacccgaccacccagggcgaacgctttgacccgcagggggcgtttattcgc
cagtggttgcccgagctggcggtggtgccggatgcgcatatccatcaaccccatgtctgg
gcgcagaaaaataacatgacactcgcttatcctgcgccgatcgtggaacataaggacgca
cgtaaaaagacactggacgcctttgagcgcgcgcgcagcgcggcttga
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