Pantoea sp. At-9b: Pat9b_1343
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Entry
Pat9b_1343 CDS
T01386
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pao
Pantoea sp. At-9b
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pao01002
]
Pat9b_1343
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pao01011
]
Pat9b_1343
Peptidases and inhibitors [BR:
pao01002
]
Cysteine peptidases
Family C82
Pat9b_1343
Peptidoglycan biosynthesis and degradation proteins [BR:
pao01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Pat9b_1343
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ADU68664
UniProt:
E6WCA4
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All DBs
Position
1510179..1511987
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AA seq
602 aa
AA seq
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MLLNNKIRCKRAVIALSLSLVLSPLAASHAAIIAALPGTAHHTLSVAESQRQIQQVFSPS
EQPFYLPGLAGIYAARNMAPLWQDRSAVQAFQQQLAEVALSGVQPQFTRWVGLLTNPAIK
GLARDVVLSDAMLGYLQFVSNVPTQGETWLYSNVPYKMAMPTVAVINQWQNAVNGGGSRA
FVLSLEPQHPQYAPMHAALKTLLNDNRPWPQLRDSGTLKPGQISNDVPALREILQRTGML
SGHSATPTPADDAVPVAPVPVSQSAQPVAVSPSAASVNDLSAQAPQAPGNVAANPVQSAN
NVYDNALVEGVKRFQHWQGLADDGAIGPRTREWLNVSPQMRAALLALNIQRLRLLPDDMH
NGIMVNIPNYSLTYYNNGATILSSRVIVGRPDRKTPLMRSALNNVVLNPPWNVPTSLVRQ
DIVPKVKQDPGYLYKHGYTLLSGWSADAQVIDPSSLDWNMVSAASFPYRIRQAPGAMNSL
GRYKFNMPSSDAIYLHDTPNHNLFQRDIRALSSGCVRVNKASELADLLLQDAGWNDSRIS
DTLKEGNTRYVPIRHRIPVNLYYLTAWVADDGQPQYRTDIYNYDNPARSGSQVLAKAGQL
LL
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgaataataagatcagatgtaagcgtgctgtcatcgcactcagtttgtcactg
gtattgtcgccactggcggccagccatgcggcaatcattgcagcgttacctggtactgcg
caccacacgctgtcggttgcggagagccagcgtcagattcagcaggttttcagccccagt
gaacaaccgttctatcttccaggcctggcggggatctatgccgcgcgtaatatggcaccg
ttgtggcaggatcggtcagcggtgcaggcgttccagcagcagctggcagaggtggcgtta
tccggcgtgcagccacaatttacccgctgggtcgggctactgaccaacccggcgatcaaa
gggctggcgcgtgatgtggtgctcagcgacgccatgctgggctacctgcaattcgtttcc
aatgtcccgacgcagggtgaaacctggctgtacagtaacgtaccttataagatggccatg
cccacggttgcggtgattaaccagtggcaaaatgccgtaaatggcggggggagccgcgcc
tttgtcctctctctcgaaccgcagcatccgcaatacgccccaatgcatgcggcgctgaaa
accctgttgaacgataaccgcccgtggccgcaattacgtgacagcggcacgctgaagccc
ggtcaaatcagtaatgatgtgcctgcgttgcgtgaaattttacagcgtaccggcatgttg
tccggtcacagtgcaacgccaaccccggcagacgatgcggtacctgtggcaccggtgccg
gtcagccagagtgcacagccggttgcggttagcccatcggctgccagtgtgaatgacctg
tcggctcaggcaccacaagcgccgggtaatgtcgcggccaatccggtgcaatcggccaac
aatgtctacgataacgcgctggtggagggggtgaaacgcttccagcactggcaaggattg
gctgatgatggcgcgattgggccacgtacccgtgagtggttgaatgtctcgccgcaaatg
cgcgcggccctgctggcactcaatatccagcgtttgcgtttgctgccggatgatatgcat
aacggcatcatggtgaatatccccaactattcactgacctactacaacaatggtgcgacc
attctgtcatcccgggtgatcgttggccgtcctgaccgtaaaacaccgctgatgcgcagc
gcattaaataatgtggtgctcaatccgccgtggaatgtgccgacgtcgctggtgcgccag
gatattgtaccgaaggtgaagcaggacccgggttatctgtataaacacggttacaccttg
ctgtcgggctggagcgctgacgcgcaggtgatcgatccttcgtcgctcgactggaatatg
gtctctgcggccagcttcccgtaccgcatccgtcaggctcccggcgcgatgaattcgctg
gggcgttataaattcaatatgccgagctcggatgcgatctacctgcacgatacaccgaac
cataacctgttccagcgtgatatccgtgcgctcagctcgggctgtgtacgtgtcaataag
gcgtcggaattggcagatctgctgttgcaggatgcgggttggaatgacagccgtatctcc
gacaccttgaaagagggcaatacccgctacgtgccgatccgtcatcgtattccggtgaat
ctctattatctgacggcctgggtggcggatgacggtcagccgcaatatcgtacagatatt
tacaattatgataacccggcgcgttcaggtagccaggtgctggctaaagcggggcaatta
ctgctctag
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