Pantoea sp. At-9b: Pat9b_1424
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Entry
Pat9b_1424 CDS
T01386
Name
(GenBank) type I secretion system ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
pao
Pantoea sp. At-9b
Pathway
pao02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Pat9b_1424
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pao02000
]
Pat9b_1424
02044 Secretion system [BR:
pao02044
]
Pat9b_1424
Transporters [BR:
pao02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Pat9b_1424
Secretion system [BR:
pao02044
]
Type I secretion system
Adhesin protein transporter
Pat9b_1424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
Peptidase_C39
AAA_29
SMC_N
AAA_18
DUF87
dNK
AAA_28
AAA_13
Motif
Other DBs
NCBI-ProteinID:
ADU68741
UniProt:
E6WDB9
LinkDB
All DBs
Position
complement(1591537..1593738)
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AA seq
733 aa
AA seq
DB search
MKENINPPPSQQSERDTLLNAVTWLVKHHGISASEDVLYAGLPRGERLTPDIAVRMLEQA
GLQAGWMERDILTLSESLYPLIIASKTGEYFILQEKCDGQYVLLSPADGNLRHLSAEELA
GTAAGFALLSKVKVQPEARGEKDILPEINQSGHWLFSNLWRYRQYFYSAALAALLANILT
LSTTFFTMNVYDRVVPTGAYATLWSLAIGVLIAITFEFTAKQIRTWLVDSAGKKADLVVG
SLLFRKTLAIRMECKPRSAGSFANQLREFESVRDFLSSATLATLSDLPFCLLFIAIMFAI
GGPLAFIPMMAIPVIIIAGVAIQWPLSRYMKENISEISQKQGLVIETIVGLETLKAAKGE
GVMQKRWNDFSALAAASSMKTRYLSTLTSNFVSYVQQICTVLIVLWGVYLIHSGELTMGS
LVGMVILSGRSLSPLAAVVGLAIRYQQAKTALHSLNQLMAMPTERDQQANFLPSPPLKGA
IALRHVGFHYPKTGLQDAQTILHPLTLTIRPGERVAILGTIGSGKSTLLKLLARLYLPTQ
GKMTMDGLDVNQIDPADWRSACGYVCQDNRLFQGTLRQNIIIGNPAVSTERFLQVAALTG
IDAIARRHPAGYDMPIGEMGQGLSGGQRQQVSLARCLLLDPSIVLMDEPTSSMDSNSEAQ
FIARLKDVIEQKTLVVVTHRIPVLSLVNRIIVLEDGKILADGPKAQIMAKLAQASVAKTP
SRTAAPGKETTNA
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaatataaatccacctccttctcaacagtcggagagagatactttactcaat
gccgttacctggcttgttaaacaccacggaatctctgccagtgaagatgtactctatgcc
ggtcttccacgaggcgaacgcttaacacccgacattgccgtgcgaatgttggaacaggcg
ggtttacaggcaggatggatggaacgcgacatcctgacgctgtcggagtcgctttacccg
ctcattattgccagcaaaacgggcgagtactttatcctgcaagaaaagtgtgacggtcag
tatgtcctgctgtcgcctgccgacggcaatctgcgccatttgtcagctgaggaattggcg
ggcacggctgccgggtttgcgttgctctccaaagtgaaggttcagcctgaggctcgcggc
gaaaaagatattctgccggagattaatcaatccggccattggctgttttcgaatctgtgg
cgctatcgtcagtacttctacagtgccgccctggctgcgctgctcgccaacatcctgacc
ttgtcgaccacctttttcaccatgaacgtctatgaccgggtggtgccaaccggtgcctat
gccaccctctggtcactggctatcggcgtattgatcgccattacttttgaattcacggcg
aaacaaattcgcacctggctggtggattctgccggtaaaaaagctgacctggtggtgggt
tcactgctgtttcgcaaaacgctggccatccgtatggagtgcaaaccgcgttcggctggc
tcctttgctaaccagctgcgtgaatttgagtcggtgcgggatttcctctcctccgcgaca
ctggctacgctgtctgaccttcccttctgcttgctgttcatcgcgattatgtttgcgatt
ggtggcccgctggcgtttattccgatgatggcgatcccggtgattatcatcgctggtgtg
gcgattcagtggccgctttcgcgctatatgaaagagaacatcagcgagatctcgcagaag
cagggactggtgatcgagaccatcgtcggcctggaaaccctgaaagcggcgaaaggcgaa
ggcgtgatgcaaaagcgctggaatgactttagcgcgctggcggcggcatcttccatgaaa
acccgctatctctccacgctgaccagcaattttgtcagctatgtacaacaaatttgtacc
gtattgattgtgctgtggggggtgtatctgattcattccggtgaactgacaatgggttcg
ctggtcgggatggtcatcctttcaggtcgttcactgtcgccgctggcggcggtggttggt
ttagcgattcgttatcagcaagccaaaaccgccctgcactccctcaaccaattgatggcg
atgccaacggaacgtgaccagcaggcgaattttttaccgtcaccgccgctgaaaggcgcc
attgcgctgcgccatgtcggcttccattacccgaaaacaggtttgcaggatgctcaaacc
attttacatccgctgacactgactattcgaccgggagaacgcgtcgcgattttaggcacc
attggcagtggaaagtcgaccctgctcaaactcctcgctcgtctgtatctgcccacccag
gggaagatgacgatggacggtctcgacgtcaatcagatcgatcccgccgactggcgctcc
gcctgcggctatgtctgccaggacaatcgactgttccagggcacgctacggcaaaacatc
attattggtaatcccgcggtgagcactgaacgctttttacaggtggccgcgctcaccggt
attgatgccattgctcgccgccacccggcaggctacgacatgcccattggcgaaatgggg
caagggctatcgggcgggcaacggcagcaggtttcgttggcccgctgcttgctgcttgat
ccgtcgatcgtgctgatggacgaacccaccagttcgatggatagcaactcggaagcgcag
tttattgcacgccttaaggacgttatcgagcagaaaaccttggtcgttgtgacccatcgc
atcccggtactgagccttgttaaccgcattattgtgctggaagacgggaaaattctggcc
gacgggccgaaagcacaaatcatggccaaacttgctcaggcttctgtggctaagactcca
tcacgcaccgcagcgccgggtaaggaaacaaccaatgcgtaa
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