Pantoea sp. At-9b: Pat9b_2063
Help
Entry
Pat9b_2063 CDS
T01386
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
pao
Pantoea sp. At-9b
Pathway
pao02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pat9b_2063
Enzymes [BR:
pao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
Pat9b_2063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_10
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
ADU69377
LinkDB
All DBs
Position
2280768..2282753
Genome browser
AA seq
661 aa
AA seq
DB search
MTDEQGQTLLYTLFGTTSPHWRLTADSDALHFAEEENAHTNLAVPLTPAQASLLRAMTVI
TSSINLTLSLHGVPVPMHFVGRKVNQATWAGTASAWGDTSSVARDLTLGLSFAEQVVSEA
NSVIVILDQRGNIQRFNRLSEEYTGLKEHEVIGRNVFQLFMTKQEAQASRRNIAGFFRDG
NSYEVERWIKTKKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRVLANTD
TVTGLPNRNAIHQQISLALETAKGAQTGVVYLDLDNFKKVNDAYGHMFGDQLLQAVSLAI
LSCLGKDQTLARLGGDEFVVLAENTSQAALEAMASRILERLRQPFRIGLIEVYSGCSLGI
ALAPLHGEDRESLIRNADTAMYHAKENGRGKFCVFASEMNQRVFEYLWLDTNLRKALDQD
HLVVYYQPKIDRDGEVRSAEALVRWNSPERGLVPPGDFIAYAEESGLIVPLGRWVMLNVL
QQIIAWRQAGIWLRVAVNVSAKQLIDQSIYSDLKQALIESGMTDCPIDIELTESCLIENE
AGALKLMKQFQELGAQVHLDDFGTGYSSLSQLARVPIDAIKLDQSFIRNINKQPVAQSLV
RAIMAVAKALELQVIAEGIETKAEEKFVMANGVDGRQGYYYAKPMPADQLGHWLAKHPAR
V
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgaacaagggcaaacgttgctatacaccttgtttggcaccaccagccctcat
tggcgtctgaccgcggacagcgatgctttacattttgccgaagaggaaaatgcccataca
aatctggcagttccgcttactcccgcgcaggccagcttgctgcgcgccatgaccgttatc
acctccagcattaacctgacgctatcgctgcatggcgtgccggtacctatgcattttgtt
ggccgtaaagtgaatcaggcaacatgggcaggcaccgcctcggcctggggtgacacctcg
tcggtcgcacgtgatttgaccctcggcctgtcgtttgccgagcaggtggtttccgaggcc
aactcggtgatcgtcatcctcgatcaacgcggtaatatccagcgtttcaatcggttaagt
gaagaatacactggtctgaaagaacacgaggtgattggccgcaatgtgttccagctgttt
atgaccaaacaggaagcacaggcctcgcgacgcaacattgccggattctttcgcgatggc
aactcctacgaagtggaacgctggatcaagacgaagaaaggtcaacgactgtttctgttt
cgtaataagttcgtgcacagcggcagcgggaaaaatgaaattttcctcatctgttcagga
accgatatcaccgaggagcgacgtgctcaggaacgcctgcgcgtgctggccaacaccgat
acggtgaccggtttacccaatcgcaacgccatccaccagcaaattagtctggcactggag
acagcgaaaggcgctcagaccggtgtggtctacctcgatttagacaatttcaaaaaggtc
aacgacgcctacggtcatatgtttggcgaccaactgctgcaagccgtttcgctggcgatc
ctcagttgccttggcaaagatcaaaccctggctcgcctcggcggcgacgagtttgtggtg
ctggcggagaataccagccaggcggcactggaagcgatggcatcgcgtattcttgaacgc
ctgcgtcagccttttcgtatcggtttgattgaggtgtacagcggctgctcgctcggtatc
gccctcgccccgctgcacggtgaagaccgtgaaagcctgatccgtaatgccgataccgcc
atgtaccatgccaaagagaatggtcgcggcaaattttgtgtgttcgccagcgagatgaac
caacgcgtatttgagtatctgtggctggataccaatctgcgtaaagcattggaccaggat
catctggtggtgtactaccagccaaaaattgatcgcgatggcgaggtgcgcagtgccgaa
gccttggtgcgctggaattcgcccgagcgcggtctggtgccaccaggcgactttatcgct
tacgccgaggagtcgggcctgattgtcccgttgggccgctgggtgatgttgaatgtgttg
cagcaaatcatcgcctggcgtcaggcgggtatttggctgcgggtggcggtgaatgtatcg
gccaaacaattgattgatcagagtatttatagcgatctcaagcaggctttgattgagagc
ggcatgacggattgcccgattgatattgaactgactgagagttgcctgatcgagaacgaa
gctggcgcgctgaagctgatgaaacagttccaggagttaggtgcacaagtgcatctcgac
gatttcgggaccggttactcttcgttgtcacagctggcgcgcgtgccgattgacgccatc
aagctggatcagagttttattcgtaatatcaataagcaaccggtggcacagtcactggtg
cgtgccattatggctgtggccaaggccctggagttgcaggtgattgccgagggtattgaa
accaaagccgaagaaaaatttgttatggctaacggtgtcgatgggcgtcagggttattac
tacgcaaaaccaatgcccgcggaccagctcgggcattggctggctaagcatcctgcccgc
gtttaa
DBGET
integrated database retrieval system
