Pantoea sp. At-9b: Pat9b_2224
Help
Entry
Pat9b_2224 CDS
T01386
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pao
Pantoea sp. At-9b
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pao03016
]
Pat9b_2224
Enzymes [BR:
pao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Pat9b_2224
Transfer RNA biogenesis [BR:
pao03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Pat9b_2224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
ADU69534
UniProt:
E6WFB3
LinkDB
All DBs
Position
complement(2429812..2430933)
Genome browser
AA seq
373 aa
AA seq
DB search
MNYSLIDQNDQLAAVCDKARQHSAVALDTEFVRTRTYYPQLGLIQLFDGEQLVLIDPLNI
SDWAPFVALLRDTQVTKFLHAGGEDLEVFLHRFGCLPDPMVDTQILAAFAGQPLSWGFAA
MVMHFNQIELDKSEARTDWLARPLTARQCEYAAADVAYLLPIAHQLVAQTEAAGHMAAAL
SECDILCQRRLDVLAPEDAWRDITNAWQLRPRQLAALQRLAAWRLNLARQKDMAVNFVIR
EENLWKVARFMPGSLGELDHLGLNGHEIRFHGKALVAMVAEAQAQDESTLPQPLGNLIDH
PHYKQTFKAIKALVQQVSEETGFSQELLASRRQINQVLSVHWGLKNPSRTPELITGWRGD
LLKARIDEILQAH
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
gtgaattattccctgatcgaccaaaatgaccaactggctgcggtgtgcgataaagcacgt
cagcattccgccgtcgcgctggatactgaattcgtccgcactcgcacttactatccacag
ctcgggctgatccagctgtttgatggcgagcaattggttctgatcgatcctctcaacatt
agcgactgggccccgtttgtcgcgctgctgcgcgatacccaggtaacaaaattcctccac
gcgggcggggaagatctcgaagtttttctgcatcgttttggctgtctgccggaccccatg
gtcgatacacaaattctggcggcgtttgccggtcagccactgtcatggggcttcgcggcg
atggtgatgcacttcaatcaaatcgaactggataaaagcgaagcccggactgactggctg
gcacgtccattgacggcacggcagtgtgaatacgcagcggcggatgtggcttatctgttg
ccgattgcccatcaactggtggcgcaaacggaagccgctggccacatggccgccgcgctg
agcgaatgcgatatcttatgtcagcgtcgcctggatgtgctggctcccgaagatgcctgg
cgggatatcaccaatgcctggcagttgcgtccccgtcagttggcggcgttgcagcgcctc
gccgcgtggcggttgaatcttgcgcggcagaaagatatggcggtgaacttcgtgatacgt
gaagagaacctgtggaaagtggcgcgctttatgcctggcagccttggcgagctggatcat
ttgggcctgaacggtcatgagatccgcttccatggtaaagcgctggtggcgatggtcgcg
gaagcacaggcgcaggatgaaagcacattgccgcaaccgttgggtaatctgattgatcac
ccgcactataagcagacattcaaagccatcaaagcgttggtacaacaggtaagcgaagag
acgggttttagccaggagttactggcttcacgtcgtcagatcaatcaggtattgagcgta
cactggggattgaaaaacccgtcacgtaccccggaattgatcacaggttggcgtggcgat
ttgctgaaggcgcgcatcgacgagattttgcaggcgcactaa
DBGET
integrated database retrieval system
