Pantoea sp. At-9b: Pat9b_2289
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Entry
Pat9b_2289 CDS
T01386
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
pao
Pantoea sp. At-9b
Pathway
pao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Pat9b_2289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pao03400
]
Pat9b_2289
DNA repair and recombination proteins [BR:
pao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Pat9b_2289
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
QSregVF_b
Motif
Other DBs
NCBI-ProteinID:
ADU69591
UniProt:
E6WA26
LinkDB
All DBs
Position
2489667..2490335
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AA seq
222 aa
AA seq
DB search
MLRVIDTETCGLQGGVVEVASVDVIDGQILNPMSDLICPDRPISHQAMAVHRITEAMVAD
KPTIEQAIGRYHGSPHYVAHNASFDRRMLPEMPGQWICTMTLARQLWPGQKYGNQALRHS
LKLDVTPPADLHAHRALYDCYVTAALLIRIMEKSGWNAEQMVSRCQPAPVADDVFPFGKY
RGQSIGSIARKDPGYLRWVLENVRDLRPPLRQALRKYVKSDQ
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgttacgcgtgatcgataccgaaacctgcggtttgcaaggtggcgtggttgaagtggct
tcggtggatgtgatcgacggtcagattctcaatccaatgagcgatttgatctgcccggat
cgaccgattagccaccaggcgatggcggtccatcgtattactgaagccatggtcgccgac
aaacccaccattgaacaggcgattggtcgttaccacggcagcccgcactatgtcgcgcac
aacgccagttttgatcgccgtatgttgccggaaatgcccgggcaatggatttgtaccatg
acgctggcgcgtcagctgtggcctggtcagaaatacggcaaccaggcgctgcggcatagc
ctgaaattggacgtcacaccgcccgccgatttgcatgcacaccgtgcgctctacgattgc
tacgtcaccgctgccctgctgattcgtatcatggaaaaatcgggctggaatgccgagcag
atggtcagtcgctgccagccagcgccagtggctgatgatgtgttcccgttcggcaaatat
cgcgggcaaagtatcggcagcattgcgcgcaaagatcccggttatctgcgttgggtgttg
gaaaatgtgcgcgatctgcgcccaccactgcggcaggcgctgcgcaagtacgtgaagagt
gatcagtag
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