Pantoea sp. At-9b: Pat9b_2309
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Entry
Pat9b_2309 CDS
T01386
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pao
Pantoea sp. At-9b
Pathway
pao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Pat9b_2309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pao03400
]
Pat9b_2309
Enzymes [BR:
pao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pat9b_2309
DNA repair and recombination proteins [BR:
pao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pat9b_2309
RecFOR pathway proteins
Pat9b_2309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_3
AAA_16
Rad17
AAA_14
TIP49
nSTAND3
AAA_2
AAA_18
RNA_helicase
AAA_17
NTPase_1
AAA_28
NB-ARC
AAA_24
Bac_DnaA
ABC_tran
TsaE
NPHP3_N
bpMoxR
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
ADU69611
UniProt:
E6WA46
LinkDB
All DBs
Position
complement(2513980..2514984)
Genome browser
AA seq
334 aa
AA seq
DB search
MIEADRLVSASSVNEEESLDRAIRPKLLAEYVGQPQVREQMEIFIKAAQLRGDALDHLLI
FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYNVADLQHIVGRSAACLGLTLSEEGALEIARRSRGTPRIANRLLRRVRDFAEVRANG
NMSGEVSASALDMLNVDSQGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDV
IEPFLIQQGFIQRTPRGRMATQHAYRHFGIAREE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagccgatcgtctggtctccgccagcagtgtcaatgaagaagagagcctcgac
cgtgccattcgtcctaagctactggcggaatatgtcggtcagccgcaggtgcgtgagcag
atggagattttcatcaaagccgcgcaactgcgtggtgacgcgctcgatcatctgttgatt
ttcggccccccgggcttgggaaaaaccacgctggccaatattgtcgccaacgagatgggc
gtcaatttgcgcaccacctctggaccggtactggagaaagcgggtgatctggccgcgatg
ctgaccaatcttgaaccgcatgatgtgctgtttattgatgagatccatcgcctgtcgccg
gtggtggaagaggtactgtatccggcaatggaagattatcagctggatatcatgattggt
gaaggcccggccgcgcgctccatcaaactggatctcccccccttcaccctgattggtgcc
acaacgcgtgccggttcgctgacctcgccgctgcgcgatcgttttggcattgtgcaacgc
cttgaattctataacgttgccgacctgcaacatattgttggtcgtagcgctgcttgcctc
ggtctgacgctgagcgaagagggcgcgttggaaatcgcccgtcgctcacgcggtacgccg
cgtattgccaaccgtctgctgcgccgtgtgcgtgacttcgccgaagtccgtgccaatggc
aatatgagcggtgaggtttccgccagcgcgctggacatgctgaatgtcgacagccagggg
tttgactatatggaccgcaagctgttgttggcgattatcgataagtttatgggtgggccg
gtggggctggataacctggcggctgccatcggtgaagaacgcgaaaccattgaagatgtg
attgaacccttcctgatccagcagggttttattcagcgcacgccgcgtggccgtatggca
acgcagcatgcgtatcgtcacttcggcattgcgcgcgaagagtaa
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