Pantoea sp. At-9b: Pat9b_2311
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Entry
Pat9b_2311 CDS
T01386
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
pao
Pantoea sp. At-9b
Pathway
pao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Pat9b_2311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pao03400
]
Pat9b_2311
Enzymes [BR:
pao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
Pat9b_2311
DNA repair and recombination proteins [BR:
pao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pat9b_2311
RecFOR pathway proteins
Pat9b_2311
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF3882
Motif
Other DBs
NCBI-ProteinID:
ADU69613
UniProt:
E6WA48
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All DBs
Position
complement(2515699..2516226)
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AA seq
175 aa
AA seq
DB search
MAIILGIDPGSRVTGYGVIRQTGRQLSYLGSGCIRTNVTDLPSRLKLIYAGVSEIITQFS
PDFFAIEQVFMAKNADSALKLGQARGAAIVAAVNLDLPVFEYAARQVKQTVTGIGSAEKS
QVQHMVRTLLKLPANPQADAADALAIAITHCHISQNAARMSDSKLVLTRGRLRSG
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggcgataattctcgggatcgatcccggttcgcgcgtcaccggttacggtgttattcgt
cagaccggccgccagctcagttatctgggcagcggctgtatccgcactaacgttactgac
ctgccttcccgcctcaagctgatctatgctggcgtcagcgaaatcatcactcagttttcc
ccggatttttttgctattgaacaagtgtttatggcaaaaaacgcggattctgcgctcaag
ctggggcaggcacgcggtgcggcgattgttgcggcggtgaatctcgacctgcccgtgttt
gaatatgcagcgcgtcaggtgaagcagacggtcaccggtatcggtagcgcggagaaaagt
caggtgcaacatatggtgcggacgttattgaagctcccggccaacccacaggccgatgcc
gccgatgcactggcgatcgccatcacgcactgccacattagccagaatgcggcacgcatg
agtgatagcaaactggtgctgacgcgagggcggctgcgatcaggctaa
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