Pantoea sp. At-9b: Pat9b_2499
Help
Entry
Pat9b_2499 CDS
T01386
Name
(GenBank) YD repeat protein
Organism
pao
Pantoea sp. At-9b
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
PAAR_motif
Colicin-DNase
RHS
WHH
Motif
Other DBs
NCBI-ProteinID:
ADU69800
UniProt:
E6WET7
LinkDB
All DBs
Position
complement(2722690..2727213)
Genome browser
AA seq
1507 aa
AA seq
DB search
MSDYLAARIGDPLVHSSALADFVGGLVEGAIVAGIVLAAGTGVGALLGGVAIATLVFSGG
LENIGNAAASLVDSLIDPGPPDAFIVSGSGNVHIKGKLAARAAGSVSRDYLNAPAAADNG
IDWAAVGMLALTGVAAAMNTALNPGAALMAVAERASHLSMDDVKEWGKNVWTSLMQPVVE
SASPYATPLPLDTVACTKGHMVTSSNFIAQGSKKVLINNQPAARNGHKSTCEAEIKLSEN
PRVRIGGDTITVRDIHSGKNIWAYMAGNLIGGALVGILPELYRFGFSRLILRGLAKDIVC
PIGGDIVIEAAVQTLHPVNIATGAKILAREEDLDFVLPDRMPLYWQRIYHSRNLATGMLG
TGWMLPFEVRLWRLPDNQLIYQDMAGRELGMGEVHPGDVIDFQGEGLKLFCSPNGAMVMQ
TSEGEHQLFEPDPTRPGEWRIHRIYDRHENVQHFSWNDDGKLVRISSDNDALDVELEYGT
HLGRLSAVYQIAAGARHLLVSYGYNQQGQLTTVTDADAIVTRRYGWDQASDMLAWHSYAT
GLKIQYQWRPAINSRHWRVHAYQVCDEQGEVLESWRIETDEQQRVARVSNDEGVSSEHHW
DALSRITAWTDAHGGHWSFNWGGDSEQLLAMTQPGGARWEYAWDERGNLTMERDPLDRTR
ITTWHPLYALPLKEVLPDGAQWQYEYNLAGDVVALTDPAGGVTRFEWNEQGDLTRRIDAL
ENSHQFWWDMRGQLIREEDCSGYQSQRQYDACGKLLSTTDALGNTDRYQWSAAGRLHSYV
RADGRETLFKYNKAGLLCGQNIDGMLERKVTLNARGQVIEAIDPAGQVTRYDFNRAGRLV
TLTNGNRQQWRFDYTPAGLLMQQQDYAGRKTEYQYNGVQQVETLIRHPVRDSQLAPLVVN
YEYDVLGRMVARETAQHRTEYHYHALSTEIHRFPYDAWRQAIINECEPTDAEVVVFQRDT
LGRLVSEQNHSGAYHHRYDALGNLSASVYPDGREMQFLRYGTGHLLEMRLTSGGRTHSLA
SYQRDRLHRETHRTQGELELETQYDIAGRITQRRSVDNLRQRLVSERRYQWDRADQIIRQ
IVTDGAPSSPAEKYSQSLWGYDAAGRMTRSIQPGGEERFWYDAADNRTSEDLHPVWDNLL
KRLEGIRWEYDGFGRMSERHDSQRGVVQRFSYDDEHRIREVLIEGDAEYTRAQYQYDALG
RRIGKQVWRRHVAQPECTHYAWSGMQMVGEHSDSKPEAAVQYVYAENSYEPIARVDSYQQ
HAEVYWYHTEINGLPDRVTDIRGDTVWQGAFAAWGRTTRESTGVDWEVPQNLRFQGQYLD
RETGLHYNTFRYYDPCGGRYTQLDPIGLMGGLNLYQYAPDVLTGIDPLGLATRLNNGQYN
VFQEHTINAEHIYSSDGVQFNRANTEFINRMNTDATFRRDMLGRYPELSDWMKNPNKASS
PPGLTWHHHEDYGRLTLVDRADHADNHSLYHPTGKGGREMWGGGEPGRRGKLDGKTGSPK
VKKGGCI
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattatctcgcggcgcgtatcggcgatccgctggtacacagctcggcactggcg
gattttgtcggtggcctggtggagggggcgattgtcgccgggatcgttcttgccgccggg
accggcgtcggtgcgctgctgggtggtgtggccattgcgacgctggtgttcagtggcggt
ctggagaacatcggcaacgcggcggcatcgctggtcgacagccttatcgaccctgggccg
ccggatgcgtttattgtcagcgggtccggcaacgtgcatatcaaaggtaagctggcagcg
cgtgcagcgggcagcgtatcgcgtgattatctcaacgcgcctgcagcggctgacaatggt
atcgactgggcggcggtaggcatgctggcgctgaccggtgtcgcggccgcgatgaacacc
gcgctcaaccccggtgccgcgctgatggcagtcgcagagcgcgccagccatctctcaatg
gatgatgtaaaagagtggggcaaaaacgtctggaccagcctgatgcaaccggtggtggaa
agcgccagcccctatgcgacaccgttaccgctcgataccgtggcctgcaccaaaggtcat
atggtcaccagcagcaattttattgcgcagggatcgaaaaaggtgctgatcaacaatcag
cccgccgcacgtaacggtcacaaaagtacctgtgaagcagaaattaaactgagtgaaaac
ccgcgcgtgcgcatcggtggcgataccatcacggtgcgcgatatccatagcggtaaaaac
atttgggcatacatggcgggtaacctgatcggtggtgcactggtgggtatcctgccggag
ctataccgctttggcttcagccgcctgattttacgcgggctggcgaaagatatcgtctgt
cccatcggtggcgatatcgtcatcgaagccgctgtccagacgttacacccggtgaatatc
gcgaccggggcgaaaatcctggcacgcgaagaggatctcgattttgtgctgccggatcgc
atgccgctctactggcagcgcatctatcacagtcgcaatctggctaccgggatgctcggt
actggctggatgctaccgtttgaagtgcgtctctggcgcttgccggataatcaactgatc
taccaggacatggctggccgtgagctgggcatgggggaagttcatcctggcgatgtgatt
gatttccagggcgaggggctgaagctgttttgcagcccgaacggcgcgatggtgatgcag
accagtgaaggtgagcatcagttgtttgagccggatccgacacggcctggtgaatggcgt
atccatcgtatctatgaccgccatgaaaacgtgcagcatttcagctggaacgatgacggc
aaactggtacgcatctccagcgataacgatgcgctggatgtggaactggaatatggcacg
catttgggacgcctgagcgcggtttatcagatcgcggcgggagcacgtcatctgctggtt
tcctacgggtataaccagcaggggcaattgacgacggtgacggatgccgacgctatcgtc
acccgtcgttacggctgggatcaggcaagcgatatgctggcgtggcatagctatgctacc
gggttgaagatccagtatcagtggcggcctgcaatcaactcgcggcactggcgcgtgcat
gcttatcaggtctgtgatgagcagggtgaagtgctggagagctggcgcattgagacggac
gagcagcagcgggttgcgcgtgtcagcaatgatgaaggcgttagcagcgagcaccactgg
gatgcactgagccgcatcaccgcatggaccgatgcccacggtggacactggtcgtttaat
tggggtggcgatagcgagcagttgctggcgatgacgcagccgggtggcgcacgctgggaa
tacgcctgggatgaacgcggcaatctgacgatggagcgtgatccgctggatcgcacccgt
atcaccacctggcatccgctgtacgcgttgccactcaaggaagtgttaccggatggcgcg
cagtggcagtacgagtacaacctggctggtgatgtcgtcgcgctgaccgatcccgcaggt
ggcgttacccgtttcgagtggaatgaacagggtgatctgacgcgacgtatcgatgcgctg
gaaaacagccatcaattctggtgggacatgcgcgggcagttgatccgtgaagaggattgc
tcgggctaccaaagccagcgccagtacgacgcctgcggaaaactgctcagcaccaccgat
gccttgggcaacactgaccgctaccagtggagcgcagcgggacgcctgcacagctatgtg
cgcgccgatgggcgggaaaccctgtttaaatacaacaaagccgggttgctgtgcggtcag
aacatcgatggcatgctggagcgcaaggtaacgcttaatgcgcgcgggcaggtaattgag
gcgattgatcccgccggacaggtgacacgctatgacttcaaccgcgccggacggctggtg
acactgaccaacggcaaccgacagcagtggcgctttgactacacgcccgccgggctgttg
atgcagcagcaggattacgccgggcgtaaaaccgaataccagtacaacggtgtgcagcag
gtggagaccttgatccgtcacccggtgcgcgacagccagctggcaccgctggtggtgaat
tacgaatacgatgtgctgggcaggatggtggcacgcgaaacggcacagcatcgcaccgaa
tatcactaccacgctctaagcaccgagatccatcgcttcccctacgatgcatggcggcag
gccatcatcaacgagtgtgaaccgacggatgcggaggtggtggtttttcagcgtgacacg
ttgggcagactggtcagcgagcagaaccattctggcgcatatcaccatcggtatgatgcg
ttgggcaacctgagcgcatcggtctatcccgacgggcgggaaatgcagttcctgcgttac
ggcaccggccatctgctggagatgcggctaacgtcgggaggccgcacgcattcgctggcg
agttatcagcgtgaccgtctgcatcgcgaaacgcatcgcacccagggtgaactggaactg
gagacgcagtacgacattgccgggcgcatcacccaacggcgcagcgtcgataatctgcgc
cagcgactggtgtcggaacggcgctaccagtgggaccgcgccgatcagatcattcgccag
attgtcactgacggcgcaccttccagcccggcagaaaaatatagccagtcattatggggt
tacgatgcagcgggtagaatgacgcgtagcattcagccgggcggcgaggaacgcttctgg
tatgacgcggcggataaccgtaccagcgaggatctgcacccggtgtgggataacctgttg
aagcgtctggagggcatccgctgggagtacgacggtttcggtcgtatgagcgaacgacat
gatagccagcgtggtgtcgtgcagcgttttagctatgacgatgaacaccgcatacgtgag
gtgttgattgaaggggatgccgaatacacccgcgcgcagtatcagtacgatgcattgggc
cgccgcatcggcaaacaggtttggcgacgtcatgttgcacaaccggaatgcacgcattac
gcgtggtccgggatgcagatggtcggggagcatagcgacagcaaacccgaggccgccgtg
cagtatgtgtatgcggaaaacagctacgaaccgattgcacgcgtcgacagctatcagcag
cacgctgaggtttactggtatcacaccgagatcaatggcctgccagaccgggtgacggat
atccgtggcgataccgtctggcagggcgcatttgccgcctgggggcgcacgacgcgggaa
agcaccggcgttgactgggaagtgccgcagaacctgcgctttcaggggcagtaccttgac
cgcgaaaccggtctgcactataacacttttcggtactatgacccgtgcggcgggcgttac
acccagttggacccgatagggttgatgggtgggttgaatttgtatcaatatgctcctgat
gtactgactggcatcgatccattaggtttagcaacccggttgaataatgggcaatataat
gtattccaggagcatacgattaacgccgaacatatatattctagcgatggtgtacagttt
aacagagcgaacactgagtttattaacaggatgaacactgatgcgacctttagacgagat
atgttaggaagatatccagagttatcggattggatgaaaaatcctaataaagcatcgagt
cctccagggttaacgtggcaccatcatgaagactatggtcgattaacattggttgaccgc
gcagaccatgcggataatcattctctctatcatccaacaggtaagggaggacgtgaaatg
tggggtggtggtgaacctgggcgccgtggaaaattagatggaaaaaccggtagtcctaaa
gtcaaaaaaggtggttgcatatga
DBGET
integrated database retrieval system
