KEGG   Pantoea sp. At-9b: Pat9b_2503
Entry
Pat9b_2503        CDS       T01386                                 
Name
(GenBank) type VI secretion ATPase, ClpV1 family
  KO
K11907  type VI secretion system protein VasG
Organism
pao  Pantoea sp. At-9b
Pathway
pao03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pao00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Pat9b_2503
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pao02044]
    Pat9b_2503
Secretion system [BR:pao02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Pat9b_2503
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_22 AAA_16 nSTAND3 Sigma54_activat AAA_7 Clp_N AAA_25 ATPase_2 AAA_14 Zeta_toxin AAA_18 NACHT T2SSE SRP54 DUF815 NBD_SMAX1 Hpr_kinase_C AAA_33
Other DBs
NCBI-ProteinID: ADU69804
UniProt: E6WEU1
LinkDB
Position
complement(2731041..2733647)
AA seq 868 aa
MSEISRAVLFGKLDTLLFTSLESATAFCKLRGNPYVELVHWLHQLMQQQDGDLQQVISHF
SLDENALTRDIVAALDRLPRGASAVSDLAEHIDSAVERAWVYASLKYGASRIRGGHLLIG
LLKTYSLASVLKGISAQFARINVDALVDQFDALLGQSKEAQQALTQPDVGAAPAAAGSST
LAQYAQDLTARARAGRIDPVTGRDEEIRQMVDILMRRRQNNPLLTGEAGVGKTAVVEGLA
LRIAAGDVPAPLRDVQLWLLDIGMLQAGAGMKGEFEARLQALINEVQSSATPIVLFVDEI
HTLVGAGGQQGTGDAANLLKPALARGQLRTIGATTWAEYKKYIEKDPALTRRFQTVQVQE
PDEAKAIQMLRSTVSALEKHHQVLLLDEAVSAAVKLSHRYIPARQLPDKAVALLDTACAR
VAVSQGAQPPALEDCLHRLAALDIEAEIAEREAKVGLGAPERQQEIARQHAALSATREAL
TARWQQERALVDQLIALRARCVSEDATALRSELDATRQQLREVQGEEPLLFAAVDASVVA
AVVADWTGIPLGRMVKNEIDAVLNLAETLNQRVIGQRHGLDLIAKRVRTSRARLDNPNKP
VGVFMLCGPSGVGKTETALALAESLYGGEQNIITINMSEFQEAHTVSTLKGAPPGYVGYG
EGGVLTEAVRRRPYSVVLLDEIEKAHPDVHELFFQVFDKGWMEDGEGRHIDFRNTIIILT
SNVGTQLISALCADPELLPQPDALSTALRKPLLEVFPPALLGRLLVVPYYPLSDAMLAQI
VRLQLARIVRRLEENHGIAADIDASVVSQIVQRCTEVESGGRMVDAILTNTLLPQMSQIL
LSAHARDERYRRVLVRCEQGEFVCQFDV
NT seq 2607 nt   +upstreamnt  +downstreamnt
atgtcagaaatcagccgagccgtgttattcggtaaactggacacgctgttatttacctcg
ctggaaagcgccaccgccttttgcaagctgcgcggcaatccctatgtcgagttggtgcac
tggttgcatcaactgatgcagcaacaggacggtgacttacagcaggtaatcagccatttt
tcactggatgaaaacgcgctgacgcgggatatcgtggcggcacttgaccgtctgccacgc
ggtgcgagtgccgtctccgatcttgccgagcacatcgacagcgccgtagagcgcgcctgg
gtctatgcctcgctcaaatacggagccagccgcattcgtggcggtcatctgctgatcggt
ctgctcaagacctacagcctcgccagtgtgctgaaaggtatttcagcgcagtttgcgcgt
attaacgtcgatgccctggtggatcaattcgatgctttactcggccagagcaaggaggcg
caacaggcgctgacgcaacctgatgtcggcgcagccccggcagcagccggcagcagcact
ctggcacagtacgcccaggatcttaccgcgcgtgcgcgtgcgggccgtatcgatccggtg
accgggcgcgatgaagagatccgtcagatggtggatatcctgatgcgccgtcgtcagaac
aatccgctgctgaccggcgaagccggtgtcggcaagacggcggtggtggaagggctggca
ctgcgcattgcggcgggtgatgtgcctgcgcccttgcgcgatgtacaactttggctgctg
gatatcggcatgttgcaggccggggctgggatgaaaggggagtttgaagcgcgcctgcaa
gcgttgatcaacgaagtgcagtcgagcgccaccccgattgtgttgtttgtggatgagatc
cacaccctggtcggcgcgggcggacagcaaggcacgggggatgccgctaacctgctgaaa
ccggcactggcacgtggacagttgcgcaccatcggtgccactacctgggcagaatataaa
aaatatatcgagaaggacccggcactgacacgtcgcttccagaccgtgcaggtgcaggag
ccggacgaagccaaagccatccagatgctacgtagcacggtcagtgcgctggagaaacat
caccaggtgctgctgctggatgaagcggtcagtgcagcggtcaaactgtcgcatcgttac
atcccggcgcggcagttaccggataaagcggtggcgttgcttgataccgcctgtgcacgt
gtcgccgtcagtcagggggcacagcctccggcgctggaagattgtttgcatcggctggcg
gcactcgacattgaagcggaaattgccgagcgcgaggcgaaagtggggctgggtgccccc
gagcgccagcaggaaattgcccggcagcatgctgcactcagcgccacgcgcgaggcattg
accgcgcgctggcagcaggaacgtgcgctggtggatcaactcatcgcgttacgtgcacgt
tgtgtcagcgaagatgcaacggcgctgcgcagtgagctggacgccacccgacagcagttg
cgtgaagtgcagggcgaagaaccgctgctgtttgccgccgtggatgccagcgtggtggcg
gccgtggtggcagactggaccggcatcccactggggcgcatggtgaaaaacgagatcgat
gcggtgctgaacctggcggaaaccctgaaccaacgggtcatcggtcagcgccatgggttg
gatctgattgcgaaacgtgtgcgcacctcacgcgcccgtctggataaccccaacaaaccg
gtcggggtgtttatgttgtgcggcccgtctggcgtgggtaaaaccgaaaccgcgctggcg
ctggccgaatcgctgtatggcggcgagcagaacatcatcaccatcaacatgagtgaattc
caggaagcgcacaccgtctccaccttgaaaggcgcgcctccgggctatgtcggttacggc
gagggtggtgtgctgaccgaggcggttcgccgtcggccttatagtgtggtgctgttggat
gaaatcgagaaagcacacccggatgtgcatgagttgttcttccaggtgttcgacaaaggc
tggatggaggacggcgaaggacgtcatatcgatttccgtaacaccatcatcatcctgacc
tccaatgtgggcacacagctgatcagcgccttgtgtgccgatccggaactgttaccgcaa
cctgacgcactcagcacggcactgcgcaaaccgctgctggaggtgttcccgcccgcgttg
cttggacgcctgctggtggtgccgtactacccgctgagcgacgcgatgctggcacaaatc
gtccggctgcaactggcacgcattgtgcgccgtctggaggagaaccacggtatcgcagcg
gacattgacgcgagtgtcgtcagccagatcgtgcagcgctgcaccgaagtggaatccggc
ggacgtatggtcgatgccatcctcaccaataccctgttgccgcaaatgagccagatactg
ctcagcgcccatgcccgcgatgaacgttaccgccgggtgctggtgcgctgtgagcagggt
gagtttgtttgccagtttgatgtctaa

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