KEGG   Pantoea sp. At-9b: Pat9b_2521
Entry
Pat9b_2521        CDS       T01386                                 
Name
(GenBank) type VI secretion protein IcmF
  KO
K11891  type VI secretion system protein ImpL
Organism
pao  Pantoea sp. At-9b
Pathway
pao03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pao00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Pat9b_2521
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pao02044]
    Pat9b_2521
Secretion system [BR:pao02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Pat9b_2521
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C Mito_carr Xpo1
Other DBs
NCBI-ProteinID: ADU69822
UniProt: E6WEV9
LinkDB
Position
complement(2749312..2752938)
AA seq 1208 aa
MLNLLFAVLTSRLAWGFVGITALSFIIWVIGPVFSIVDSRPLEPEQNRVISIALLYLVWG
LSQAIPRLYNMWLNRKLMSSLETTPTGEPEQDRKRLTNEEQVLASRFGEATEMLKKAHFQ
RHNSKGTPFWAQRFSRQYLYQLPWYMIIGAPGAGKTTALVNSGLQFPLADKFGKAALRGI
GGTRNCDWWFTNDAVLLDTAGRYTTQESQQERDASEWHHFLALLCKYRGRQPINGVIVTL
SVADLLSQTPEALRNQALALRQRLMELHDRLGIRFPVYVLVTKADLLKGFRSYFAGLDKT
QREQIWGFTFPWAQASTADFELSSQFQQEYSLLQQRLDAGLADTLLTESDAQARAESYLF
PQEFAALRPLLAEALDTLFARSDFETQFAPRGIYFASGTQEGLPFDRVMGELTRALHLPG
QQDGESGRWDQVGKDAPIPPTKGQSFFLKDMLEDVVFQESGLAASNRWWELRNRAGLWSG
YLALLVIVVIAGALWLTSYSKNKAYLQEMAAKTPQVEQLGEQLQRQGSGDLFALVPYLNT
LLHLPESKDFSLQDPPLTHRMWLYRGTEVSDASQALYNKALKQLLLPQVAQNITRWLRND
NGSDADYSYEALKAYQMLYQPKHYDGKFLQAWLMLNISRELPQNVTQQEVQQLAWHLQQL
LETQIQSSPYAQDDALVKREQALINQMPLSQRVYGRLKRLLQRDGSLPTVTLAALGGPQS
ELVFSRKSGKSVNDGVPGLYTPDGYWQHVDKQIAPVTQALYQDDRWVLGGTTQQENSQQT
DLAVRQLYMQDYIRQWEQFLSDIQLNNSADLAQRINTARLLSGNHSPLRQLVINLSKVLT
LTRASTDDKAAQTAPPASDNSATRTLQALFSAPKANAAQSDANPAPEQVVGAHFASIIEL
AQPLQQGSKVLAVDDFLHQIDDLYRYLTAVQDAANSGMPPPSSDAISRVQASAGRLPGTL
QNMVSSMAVGASSDAQRRDMDNVRKRIQMEVGSFCQQAIAGRYPLVRTGRNEVTPDDLAR
MFAPGSGLMDSFFRDNLASKVDTTHAAWRFTPGIDGKTLPGGEALLRPFQQAQSIRDAFF
TNGATTPSFRVTLRTVKMDNDILTLTLDVDGQILRYSHGPQAVQMVSWPGPGGTSQVRMQ
LGLTNGTTSTLVTSGPWALNRFFDRARLTPSGGLTREASFNVEGHQVTLSFTPGSIRNPF
QLPAFSCP
NT seq 3627 nt   +upstreamnt  +downstreamnt
atgctgaatctgctttttgccgtactgaccagccgcctcgcctggggttttgtcggtatc
acggcgctgtcatttatcatctgggtgattggcccggtgttctcgattgtcgattcgcgg
ccgctcgaaccggagcagaatcgcgtgatcagtattgccttgctgtatctggtgtggggg
ttgagccaggcgattcctcgcctctacaacatgtggctcaaccgtaaactgatgtcgagc
ctggaaaccaccccgaccggtgagcctgaacaggatcgtaaacgcctgaccaacgaggag
caggtgctggcgagccgttttggcgaagctacggagatgctgaaaaaagcgcatttccag
cgtcacaacagcaaaggtacgccgttttgggcgcagcgtttcagccgccagtacctctat
caactgccgtggtacatgatcatcggcgcaccgggtgccggaaaaactaccgcgctggtc
aattccggtctgcaattcccgctggctgataagttcggtaaggcggcgctgcggggcatt
gggggtacgcgcaactgcgactggtggtttacgaatgacgcggtgctgctggacaccgcc
gggcgctacaccacccaggaaagccaacaggagcgcgatgccagcgagtggcaccatttt
ctggcgttgctttgcaaataccgtggccgccagccgatcaatggtgtgatcgtcaccctg
agcgtggcggatttattaagtcagacgccggaagccttgcgcaatcaggcgctggcctta
cgtcagcgtctgatggaactgcacgaccgtctcggtattcgtttcccggtctacgtactg
gtcaccaaggcggatttgttgaaggggttccgcagctattttgccgggctggataaaacc
cagcgcgaacaaatctggggcttcaccttcccctgggcgcaggcgtctacggcagatttc
gaactgagtagccagttccagcaggagtattcgctgctgcaacaacgtctggatgccggg
ttagccgataccttgctgacggaaagcgacgcccaggcgcgagcggaaagttatctgttc
ccgcaggagtttgccgcattacgtccgttgctggccgaagcactggataccttattcgcc
cgctccgattttgaaacccagttcgccccgcgcggcatctactttgccagtggcacccag
gaagggctgccgtttgaccgcgtgatgggggagttaacccgcgcgttgcatttgccggga
caacaggacggcgaatcaggccgctgggatcaggtggggaaagatgcaccaatcccgccg
accaaagggcaaagctttttcctgaaagacatgctggaagatgtggtatttcaggagtcc
ggtctggcagccagcaatcgctggtgggaactgcgcaatcgcgcgggattatggtccggc
tatctggcgctgttggtcatcgtggtgattgctggtgcgttgtggctgaccagttacagt
aaaaacaaagcatatttgcaggagatggccgccaaaacgccgcaggttgagcaacttggc
gagcagttgcaacggcagggcagcggcgatttgtttgcgctggtaccgtatctcaacacg
ctgttgcatctgccggagagcaaagacttttcattgcaggacccgccgctgacgcatcgt
atgtggttgtaccgtggcactgaagtgagtgacgccagccaggcactgtacaacaaagcg
ctgaagcaattgttgctgccacaggtggcgcaaaacatcacccgctggctgcgtaatgac
aacggcagtgatgcggattacagctacgaggcgctgaaagcgtatcagatgctgtatcaa
ccgaagcattatgatggcaagttcctgcaagcctggctgatgctgaatatctcgcgtgag
ctgccgcagaacgtgacccagcaggaagtccaacagctggcgtggcatctgcaacagctg
ctggaaacgcaaatccagtcctcgccgtatgcgcaggatgatgcgctggtaaagcgcgag
caggcgctgattaatcagatgccgctatcacagcgcgtttacggacgcctgaagcgcctg
ctacaacgtgatggcagcttacccacggtcaccctcgccgcgctcggcggtccacaaagc
gaactggtgttctcacgtaaaagcggtaaatcggtcaacgatggcgtccccggcctgtat
accccggacggatactggcagcatgttgataagcaaattgcgccggtgacgcaggcactg
taccaggacgatcgctgggtactgggcggcaccacgcagcaggaaaacagccagcagacc
gacttagcggtgcgccagctttatatgcaggattacattcgccagtgggaacaattcctc
agcgatattcagctcaataacagcgccgaccttgcacagcgcatcaacactgcccgtctg
ctttctggcaaccactcaccgttacgccagttggtcatcaacctgagcaaagtgctgacg
ctgacgcgtgcatcaacggatgacaaagcggcacaaactgcgccgccagcgtcagacaac
agcgccacccgcaccttacaggcgttattcagtgcgccgaaggccaatgcggcgcagagc
gacgctaacccggcaccggaacaagtggtgggtgcgcattttgcctcgatcatcgaactg
gcgcagccgttacaacagggcagtaaagtattggcggtggatgattttctgcaccagatt
gacgatctctatcgttacctgacggcggtgcaggatgcggccaacagcgggatgccaccg
ccatcgagcgatgccatcagccgcgtacaggccagcgcaggtcgtttacccggaacgtta
caaaacatggtctccagcatggcggtgggggccagttcggacgcccagcgtcgcgatatg
gataacgtgcgtaaacgtatccagatggaggtgggcagtttctgccagcaggccatcgcc
ggacgttatccgctggtgcgcactggccgcaacgaagtgacacccgacgatctggcgcgc
atgtttgcgccgggaagcggtctgatggacagcttcttccgtgacaatctggcgagcaaa
gtcgataccacccacgcggcctggcgtttcacgccggggattgatggcaaaaccttgccg
ggtggtgaggcgttgctgcgtccgttccagcaggcccagtcaattcgcgatgcgttcttt
accaatggtgccaccacgccatccttccgcgtcacactgcgcacggtgaaaatggataac
gatatcctcaccctgacgctggatgtcgatggacagatcctgcgctacagccatggccca
caggcggtacagatggtcagttggccggggcctggtggcaccagccaggtgcgtatgcag
cttggcttaaccaatggcaccacctccacgctggtcaccagcggtccctgggcactgaat
cgctttttcgatcgcgcccggctgaccccgtccggcggcctgacgcgcgaagccagcttt
aacgtcgaaggacatcaggtcacgctgtcgtttacgcccggcagtattcgcaacccgttc
cagcttcccgcttttagctgcccctga

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