Pantoea sp. At-9b: Pat9b_2886
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Entry
Pat9b_2886 CDS
T01386
Name
(GenBank) ABC transporter related protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pao
Pantoea sp. At-9b
Pathway
pao02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pat9b_2886
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pao02000
]
Pat9b_2886
Transporters [BR:
pao02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Pat9b_2886
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
Rad17
SMC_N
AAA_25
AAA
IstB_IS21
ORC-CDC6-like
AAA_16
AAA_28
AAA_22
AAA_5
AAA_18
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ADU70186
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Position
complement(3169456..3170445)
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AA seq
329 aa
AA seq
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MNNAPVTVRLHNCSRRFHHHLALHPLDLTVNAGETLVLLGPSGCGKTTTLRIISGLERCD
AGGEVWFDGRNVTELPIEKRNVGMVFQNYALFPNLNVADNVAYGLKVQGVPRAEREARVQ
EMLALVDLSALAQRSIDKLSGGQKQRVALARALAARPKVLLFDEPLAALDARLRDRLRLE
IGALLKQLAITAVYVTHDQQEAMALGDRIAVMEHGRLVQIDTPQRIYQHPASKFVADFVG
AINCVDVDARGNPQRFCRPEDVLLASDQRYSRQGFVVASTFLGASQRLMIDIGLAAPIQV
DRHAREAWHAGQPVSWSLAQDAALHFSAS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgccccagtcactgttcggcttcacaattgctcgcgtcgttttcatcatcac
ctggcgctgcacccgctggacctgacggttaatgccggggaaaccctggtgctgctcggc
ccctcgggctgcggtaaaaccaccacgttgcgtatcatcagtgggctggaacgctgtgat
gccggtggtgaagtgtggtttgacgggcgcaacgtcaccgagttaccgattgagaaacgt
aatgttggcatggtgttccagaactacgcgctgtttcccaatctcaacgtggctgacaac
gtcgcctatggcctgaaagtgcagggcgtaccgcgtgccgaacgtgaggcgcgggtacag
gagatgctggcgctggtggatctcagcgcgttggcgcagcgtagcatcgacaaactctcc
ggtggacagaaacagcgtgtggccctggcgcgcgcgctggcagcacgccctaaagtcttg
ttgtttgatgagccgctggcggcactggatgcgcgcctgcgcgaccgtttacggctggag
attggcgcattgctaaaacagctggcgatcactgcggtgtacgtgacgcacgaccagcaa
gaagcgatggcactcggtgaccgcattgctgtgatggagcacgggcggttggtgcaaatc
gatacgccacaacgcatttatcaacatccggcctcaaaatttgtcgccgattttgttggt
gcgattaactgcgttgatgtggatgcccgcggcaacccgcaacgtttctgtcgcccggaa
gatgtgctgctcgccagtgatcaacgctattcccgacaggggtttgttgttgccagtacc
tttctcggcgcgtctcagcggctgatgattgatatcggccttgccgcaccgatccaggtg
gatcgtcatgcgcgtgaagcctggcatgccggacaaccggtgagctggtcgctggcgcag
gatgccgccctccatttttctgcttcctga
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