Pantoea sp. At-9b: Pat9b_2982
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Entry
Pat9b_2982 CDS
T01386
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pao
Pantoea sp. At-9b
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pao03009
]
Pat9b_2982
Enzymes [BR:
pao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Pat9b_2982
Ribosome biogenesis [BR:
pao03009
]
Prokaryotic type
rRNA helicases
Pat9b_2982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_11
DUF3834
CMS1
WSD
Motif
Other DBs
NCBI-ProteinID:
ADU70281
UniProt:
E6WF57
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All DBs
Position
3270630..3271958
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AA seq
442 aa
AA seq
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MTVTTFSELELDESLLDALQEKGFTRPTAIQAEAIPAALEGRDVLGSAPTGTGKTAAYLL
PAMQHLIDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETIAGETRW
RKQTLLFSATLEGDNIKDFAERLLNDPVAVEADPSQRERKKIQQWYYRADDLEHKTKLLV
HLLKQPEVTRSIVFVRKRERLHELVTWLHEAGIRCSYLEGEMVQAKRNEALKRLNDGRVN
VLVATDVAARGIDIEDVSHVFNYDMPRTADIYLHRIGRTARAGRKGIALSLVEAHDHVLL
GKISRYINEPLKSRTIDELRPESRAPSAKVTGKPSKKVLAKRKEQKEKEAEKPRVKKRHR
DTKNIGKRRKASGSGTPEQNAE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtaaccacattctccgaactcgaactcgacgaaagcctgctggatgccctgcag
gaaaaaggcttcacgcgcccgacagccatccaggctgaggccatccctgccgcgctggag
ggccgtgacgtactgggttcagcaccgaccggaacggggaaaaccgcagcctatctgctg
ccggctatgcagcacctgatcgattttcctcgtaaaaaatcaggcccgccgcgcatttta
attttaacacccacgcgtgaactggcgatgcaggttgccgatcatgcgcgtgagttagcg
aaacatacgcatctggatatcgccaccatcactggcggcgttgcctacatgaaccacgct
gaggtattcagcgaaaatcaggatatcgtggtagcgaccactggccgcctgctgcaatac
atcaaagaagaaaactttgattgccgtgcggttgaaaccctgatcctcgatgaagccgac
cgtatgctcgacatgggatttgcccaggatatcgagaccatcgcaggcgaaacccgctgg
cgtaagcagactctgctgttctctgccacgctggaaggcgacaacattaaagacttcgct
gagcgcctgctgaacgacccggttgccgtcgaagcggatcccagccagcgcgagcgtaag
aaaatccagcagtggtattaccgtgccgacgatcttgagcataaaaccaagctgttggta
catttgctgaaacagccggaagtcacccgctcgattgtgtttgtccgcaaacgtgagcgc
ctgcatgagctggtcacctggctgcacgaagccggaatccgttgtagctatcttgaaggc
gaaatggtgcaggccaaacgtaacgaggctctgaaacgcctgaatgatggccgcgttaac
gtattagtcgcaaccgatgttgcggctcgcggcatcgatatcgaagatgtcagccacgtg
ttcaactacgacatgccgcgtaccgcggatatctatctgcaccgtatcggacgtaccgcg
cgtgccggacgcaaaggcatcgcactgtcactggttgaagcgcatgatcatgtgctgctg
ggcaaaatcagccgctacattaatgagccgttgaaatcacgcactattgatgagttgcgc
ccggagtcacgcgcacccagcgctaaagtgacaggcaaaccgtcgaaaaaggtgcttgcg
aagcgtaaagagcagaaagagaaagaagctgagaaaccgcgtgtgaagaaacgtcaccgc
gataccaaaaacattggcaaacgccgcaaagcaagcggttccggcacaccggaacagaat
gcggaataa
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