Pantoea sp. At-9b: Pat9b_3033
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Entry
Pat9b_3033 CDS
T01386
Name
(GenBank) tRNA/rRNA methyltransferase (SpoU)
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
pao
Pantoea sp. At-9b
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pao03009
]
Pat9b_3033
03016 Transfer RNA biogenesis [BR:
pao03016
]
Pat9b_3033
Ribosome biogenesis [BR:
pao03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Pat9b_3033
Transfer RNA biogenesis [BR:
pao03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
Pat9b_3033
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
ADU70332
UniProt:
E6WFQ8
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All DBs
Position
complement(3322072..3323151)
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AA seq
359 aa
AA seq
DB search
MNDEIKGKSGKVKVMYVRGEDEGQKGSRAPNPRTGKGGRPAARQEENRRSGPRTGRNNEE
GGRGAGRRNDRGDDSRKSRGYEDSPWRTISRPPVAEEGAQEEGAISKPAIDPEQIRRQRQ
EETRVYGENACQALFQSRPESIVRAWFVQSVTPRFRETLRWLAANRKAYHVVEDAELAKA
SGTEHHGGVCFIIKKRMGMAVSEWLSQAEAKDCVLALEDVSNPHNLGGIMRSCAHFGVKG
LLVNDASLLESGAAVRTAEGGAEHVQAISGESFSAGLEAFRKAGYTIVTTSSHEGTPLAK
AELPAKMVLVLGQEREGLSDSAFQQGDMSLSIGGTGNVESLNVSVATGILLAEWWRQNA
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgaaattaaaggcaaaagcggcaaggtaaaagtgatgtatgtacgtggtgag
gatgagggccagaaaggctcgcgtgcgccaaacccccgtaccggcaaaggcggccgtcct
gctgcgcgccaggaagagaatcgtcgttctggcccccgcactggacgtaataatgaagaa
ggcggacgcggtgccggccgtcgcaacgatcgtggtgacgatagccgcaaatcacggggt
tacgaagattcaccgtggcgcaccatttcacgcccaccggtagcggaagagggcgcgcag
gaagagggtgccatcagcaaaccggccatcgacccggagcagatccgtcgtcagcgtcag
gaagagacgcgcgtttacggcgagaacgcctgtcaggcgctgttccaaagccgtccggaa
agcatcgtccgtgcctggtttgtccagagcgtgacgccgcgcttccgtgaaacgttgcgt
tggctggcggcgaaccgcaaagcctatcacgtggtggaagacgccgagctggcgaaagcg
tcgggtacggaacatcatggcggcgtgtgctttattattaagaagcgcatggggatggcg
gtgtcagaatggttaagccaggccgaagccaaagattgcgtgctggcgctggaagatgtc
agcaacccgcataacctcggtggcatcatgcgtagctgtgcgcacttcggtgtgaagggg
ctgctggtgaatgatgcgtccctactggaatcgggtgctgcggtgcgtaccgcagaaggc
ggcgcggagcatgttcaggcgatcagcggcgaaagcttctcagccggtctggaagccttc
cgtaaagcgggttacaccattgtgaccacctccagccatgaaggtacgccgctggcgaaa
gcggaactgccagccaaaatggtgttggtgctgggccaggaacgtgaaggtttgtccgat
agcgctttccagcaaggtgacatgagcctgtcgattggcggcaccggtaacgtagaaagc
cttaacgtgtcggtggcaaccggcatcctgcttgccgaatggtggcgacagaacgcataa
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