Pantoea sp. At-9b: Pat9b_3075
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Entry
Pat9b_3075 CDS
T01386
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pao
Pantoea sp. At-9b
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pao03016
]
Pat9b_3075
Enzymes [BR:
pao01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Pat9b_3075
Transfer RNA biogenesis [BR:
pao03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pat9b_3075
Prokaryotic type
Pat9b_3075
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
DUF2496
Motif
Other DBs
NCBI-ProteinID:
ADU70374
UniProt:
E6WG94
LinkDB
All DBs
Position
complement(3372954..3373997)
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AA seq
347 aa
AA seq
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MSELLYLHGVPRATGVIKANPEDFVVIEDLGYPYDGEGEQLLVRIRKIGCNTRFVAEALA
KFLGVHVRDLSYAGMKDRHAVTEQTLCFRLPGNAMPDLSEFKLEGVEILQVVRHKRKLRT
GALAGNAFRLVIRQISDRAAVEQRLQKIQKSGVPNYFGEQRFGREGNNLTQAQQWAQDRF
RPRDRNKKGLLLSATRSHLFNQVTSARLQRDGHLDAVMSGDALQLTGRGSWFVAQTEELA
ELQQRVNQDELRITAPLPGRGDWGPQAEALEFEQHSLAGAVELITLLERERVDAARRAMR
VVPKDLHWNWWDDVTLEMAFWLPAGSFATSVVRELLQQEGNDADIAE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagttgctgtacctgcatggtgtgccgcgcgccactggtgtgatcaaagccaat
ccggaagattttgtcgttatcgaggatctcggttatccctatgatggcgaaggcgaacag
ctgctggtgcgtattcgtaaaatcggctgcaacacccgctttgttgccgaggcgctggcg
aaatttctcggggtgcatgtgcgtgatctcagctatgccgggatgaaagaccgccatgca
gtgacggaacagacgctgtgcttccgtttgccgggcaacgccatgcctgatctgtctgaa
tttaagctggagggtgtagaaatcctgcaggtagtgcgccacaagcgtaaactacgtacc
ggcgcgctggcagggaatgcatttcgtctggtgatccgccaaatctcggaccgggctgcg
gtggaacagcgtttacagaaaattcagaaaagcggtgtgcctaactattttggcgagcag
cgttttggtcgtgagggtaataatctgactcaggcgcagcagtgggcgcaggatcgtttt
cgcccgcgcgatcgcaataaaaaaggattgttgctttcggccacccgcagccacctgttt
aatcaggtgaccagcgcccgtttgcagcgagacggtcatctcgacgcagtgatgagcggc
gatgcgttgcaactgaccgggcgtggtagctggtttgttgcgcagacggaagaactggcg
gaactgcagcagcgcgtgaatcaggatgaactgcgtattaccgcgccgttaccgggtcgt
ggtgactggggaccccaggcggaagcgcttgaatttgaacaacacagcctggcaggtgcg
gtagaattgattacactgcttgagcgtgaacgtgttgacgcagcacgtcgtgcgatgcgt
gtggtgccaaaggacttgcactggaactggtgggatgatgtgacgctggagatggcgttc
tggctgcctgcgggcagttttgctaccagcgtcgtgcgtgagcttctccaacaagaaggt
aacgatgcggatattgctgagtaa
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