Pantoea sp. At-9b: Pat9b_3096
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Entry
Pat9b_3096 CDS
T01386
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pao
Pantoea sp. At-9b
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pao03009
]
Pat9b_3096
Enzymes [BR:
pao01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Pat9b_3096
Ribosome biogenesis [BR:
pao03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Pat9b_3096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
PCMT
Methyltransf_25
RrnaAD
MTS
TRM5-TYW2_MTfase
Cons_hypoth95
Methyltransf_23
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
ADU70395
UniProt:
E6WGB5
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All DBs
Position
complement(3395232..3396548)
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AA seq
438 aa
AA seq
DB search
MAQFYSAKQRVTTRQRITVTIEDLDPFGQGVARHNGKAMFVSGALPGEQAEVSVLEDKRQ
YTRAKATRITNPSAERVTPRCPHYGVCGGCQQQHVSVALQEHSKAQALARMLSRDAPLPV
RVDEIISGHAWGYRRRARLGLQWQPKQQRLQMGFRKAASNDLVELTQCPILAPELEALLL
PLHRCLSDLNTVKRLGHVELVLADNGPLMVLRHLDALSADDRAKLERFSHEHDVMLYLAD
GSDDLTALQSDTPFYRSFDLQLTFSPQDFIQVNDGVNQQMVAKAIDWLDLQPEDRVLDLF
CGMGNFTLPIGKFVENAVGVEGVAALVRQAAYNADLNNLKNVRFFQHNLEEDVARQPWAA
QGFNKVLLDPARAGAAGVMSHIVKLAPQRVVYVSCNPTTLARDSQTLLSAGYHLERVAML
DMFPHTSHLESMVLFSKT
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattttactccgcaaaacagcgggtgacgaccagacagcgtattaccgtcacc
atcgaagaccttgatccctttggacaaggtgtggcgcgccataatggcaaagccatgttt
gtgagtggcgcattacccggtgagcaggcggaagtgtcggtgttggaagataaacgccag
tacacgcgcgcgaaagccacgcgcatcaccaaccccagcgcagaacgggtgacgccccgt
tgcccgcactatggtgtctgcggcggttgccagcagcagcatgtatcggtggcgttacag
gaacacagcaaagcacaagcgctggcgcggatgctcagccgtgacgcccctctgccggtg
cgtgtcgatgaaatcatcagcggccatgcctggggctaccgtcgccgcgcgcgtttgggc
ttgcagtggcaaccaaagcagcagcgtttgcagatgggcttccgcaaagccgccagtaac
gatctggtggagttaacgcaatgccctattctggcgcccgaacttgaagcgttgctgttg
ccgttgcaccgctgcctcagtgacttaaatacggtgaagcgtctgggccatgttgagctg
gtgctggcggataatggtccgctaatggtcttgcgccatcttgatgcattgtccgctgac
gatcgtgcaaaactggaacgcttttcgcatgaacatgatgtgatgctgtatctggctgac
ggcagcgacgatctgaccgccttgcagtccgatacgccgttctatcgctcattcgacctg
caactgaccttcagcccccaggatttcattcaggtgaatgatggggtgaatcagcagatg
gtggcaaaagccattgactggcttgacttacagccagaggaccgggtgctggatctgttt
tgcggtatgggcaacttcacgttaccgatcggaaagttcgtagaaaatgccgttggtgtg
gagggcgttgcagcattagtacggcaggcagcgtataatgcagacctgaataatctgaaa
aatgtccgttttttccagcataacctggaagaagacgtagcgcgccagccatgggctgcg
cagggatttaataaggtgttactggacccggcgcgcgccggggcggcgggggtgatgtcg
cacatagttaaacttgcgccacaacgcgtggtctatgtttcttgtaacccaacaacactt
gcccgtgacagtcagacattactgtcagcgggctaccatttggaaagggtcgcgatgctg
gatatgttccctcataccagccatctcgaatccatggtgctgttcagcaaaacataa
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