Pantoea sp. At-9b: Pat9b_3134
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Entry
Pat9b_3134 CDS
T01386
Name
(GenBank) NUDIX hydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pao
Pantoea sp. At-9b
Pathway
pao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pat9b_3134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pao03019
]
Pat9b_3134
Messenger RNA biogenesis [BR:
pao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Pat9b_3134
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
ADU70431
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Position
complement(3442571..3443098)
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AA seq
175 aa
AA seq
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MIDDDGYRPNVGIVICNRQGQVLWARRFGQHSWQFPQGGINPGETAEQAMYRELFEEVGL
HRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLMCSDADINVQHSSTPE
FDGWRWVSFWYPVRQVVSFKRDVYRRVMKEFAGVVMSMQESAGQRNAAAHRRKRG
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatgatgatggctaccgcccgaatgttggtatcgtaatctgtaacaggcaggga
caagtgttatgggccaggcgctttggacagcactcctggcaatttcctcagggaggcatc
aatcccggtgaaaccgcagaacaggcgatgtatcgcgaactgtttgaagaagtgggtttg
caccgcaaagatgttcgaatacttgcttcaacccgtaactggttacgttacaaattgcca
aaacgtttggtgcgttgggacacaaagccggtatgtatcggccagaaacaaaagtggttt
cttctgcagttgatgtgtagtgacgcggatatcaatgtgcaacacagcagcacgccagag
ttcgacggttggcgctgggtcagcttctggtatccggtgcgtcaggttgtctccttcaaa
cgtgatgtgtaccgccgcgtaatgaaggaattcgctggcgtggtgatgtctatgcaggag
agtgcggggcagcgtaatgccgcagcccatcgacgtaaaagaggatag
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