Pantoea sp. At-9b: Pat9b_3239
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Entry
Pat9b_3239 CDS
T01386
Name
(GenBank) Ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
pao
Pantoea sp. At-9b
Pathway
pao00330
Arginine and proline metabolism
pao00480
Glutathione metabolism
pao01100
Metabolic pathways
pao01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Pat9b_3239
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Pat9b_3239
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
Pat9b_3239
Enzymes [BR:
pao01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
Pat9b_3239
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Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ADU70535
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Position
complement(3574818..3576965)
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AA seq
715 aa
AA seq
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MTPLKIAASAAVAPNLSLNTMRDVVTLDNTDFTDVAAVVVSLADTRSGVLALLRQTGFNL
PVFVANAFDEEVLRLPGVVAEINGAPEEWEALEEAAQAYEAELLPPFFDTLTRYVDMQNS
TFACPGHQGGAFFKKHPAGRQFYEFYGENVFRSDMCNADVKLGDLLIHEGSAKDAQKYAA
KVFNADKTYFVLNGTSSANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLEA
ARNPFGFIGGIDAHCFDEGYLREQVKKVAPKRAKDQRPFRLAIIQLGTYDGTVYNARQVV
DRIGHLCDYILFDSAWLGYEQFIPLMEGCSPLTLELNENDPGIFVTQSVHKQLAGFSQTS
QIHKKDNHLRGQKRFCPHKRLNNAFMLHASTSPFYPLFAALDINARMHQGEAGRSMWHEC
VTLGIDARKAILERCEMILPFLPEQVHGQPWQAAETETIAADPAYFSFEPGAKWHGFAGY
ASEQYLVDPCKLLLTTPGIDAASGEYTEFGIPATILANYLRENGIVPEKCDLNSILFLLT
PAESAEKMAHLVAMLEQFEQHVKEDALLAEVLPSVYRKNMARYQGYTLRRLCQEMHDLYV
SYGVKDLQKAMFREACFPPVKVNPQDAHQAYIRGDVELVPIAKAEGRIAAEGALPYPPGV
LCVVPGEVWGGAVQRYFLALEEGINLLPGFSPELQGVYTEEDDSGRKHLVANMMV
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgacaccactaaaaattgctgccagcgctgctgtagcgccgaacctgagcctgaacacc
atgcgcgacgtggtgacgctggacaacactgactttaccgatgtggcggctgttgtcgtc
tctttggcggatacgcgcagtggcgtgttggcgctgttgcgccagaccggcttcaacctg
ccggtattcgttgccaatgcctttgacgaagaggtgctgcgactgccgggcgtggttgct
gaaatcaacggcgcaccggaggagtgggaggcgttagaagaggccgcgcaggcttatgaa
gcggaactgctgccaccgttctttgacaccctgacgcgctatgtcgatatgcaaaacagc
acctttgcctgtccgggacatcagggcggtgcctttttcaaaaagcatccggccggtcgt
cagttctatgaattctatggcgaaaacgtcttccgttccgatatgtgcaacgcggatgtc
aaactgggcgatttgctgatccacgaaggttcggctaaagatgcgcagaagtatgcggcc
aaagtgtttaacgctgacaaaacctatttcgtgttgaacgggacttccagcgctaacaaa
gtggtgaccaacgcgctgctgacacgtggtgatttggtgctgttcgaccgcaacaaccat
aaatctaaccatcatggtgcgctgattcaggcgggagccacgccggtgtatctcgaagcg
gcgcgtaacccgttcggctttattggcggcattgatgcgcattgctttgatgaaggctat
ctgcgtgagcaggtcaagaaagtcgcgccgaagcgcgctaaagatcagcgtccgttccgt
ctggcgatcattcagctcggtacctacgacggcacggtgtataacgcgcgccaggtggtg
gatcgcatcggccatctgtgtgattacatcctgtttgattccgcctggctgggttacgag
caatttatcccgctgatggaggggtgctcgccgttaacgctggagctgaatgagaacgat
ccgggaatttttgtcacccagtcggtgcataagcagctggccggattctcacagacttct
cagattcacaagaaagataaccatctgcgcgggcagaaacgcttttgtccgcataagcgc
ctgaacaacgcctttatgctgcacgcgtccaccagcccgttctacccgttgttcgcggcg
ttggatattaacgcacggatgcatcagggcgaggcgggtcgtagcatgtggcacgaatgc
gtcacgctgggcattgatgcgcgtaaagcgattctggaacgctgtgagatgattctgcca
ttcctgccggaacaggtgcatggtcaaccgtggcaggcagcagaaaccgagacgatcgcc
gccgatcctgcttacttcagcttcgaacctggggcgaaatggcacggttttgccggttat
gccagtgagcaatatctggttgacccttgcaaactgctgctcactacgccaggcattgat
gccgccagcggggagtacaccgagttcggcattccggccaccattctggccaattacctg
cgcgaaaacggtattgtgccggaaaaatgcgacctcaactcaatcctgttcctgctgacg
ccagcggaaagcgcggagaagatggcgcatctggtggcgatgctggagcagttcgaacag
cacgtgaaagaagacgcgctgctggcggaggtgctgccgagtgtgtatcgcaaaaatatg
gcgcgttatcaaggctataccctgcgtcgcctgtgccaggaaatgcatgatttgtacgtc
agctatggtgtgaaagatctgcaaaaagccatgttccgcgaagcctgcttcccgccggtt
aaggtaaacccgcaggatgcacatcaggcgtatattcgcggtgacgtcgagctggtgccg
attgccaaagcggaagggcgcatcgccgcagaaggtgcattaccttaccctcctggcgtg
ctgtgcgtggtgccgggcgaagtctggggtggcgcggtgcagcgctatttcctcgcgctg
gaagaggggatcaacctgctgccgggcttctcgccggagttgcagggggtttacaccgaa
gaggatgacagcggacgtaagcatttagtggcgaatatgatggtttaa
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