Pantoea sp. At-9b: Pat9b_3568
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Entry
Pat9b_3568 CDS
T01386
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K22051
miniconductance mechanosensitive channel
Organism
pao
Pantoea sp. At-9b
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pao02000
]
Pat9b_3568
Transporters [BR:
pao02000
]
Other transporters
Pores ion channels [TC:
1
]
Pat9b_3568
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
DUF5347
COMM_HN
Motif
Other DBs
NCBI-ProteinID:
ADU70858
UniProt:
E6WGE6
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All DBs
Position
3910081..3913416
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AA seq
1111 aa
AA seq
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MRAFLILLLSLWLSSPVFAATVPQASDLKQELDAVKSAKSSPAQTEQIQTLETALNFLAE
RDDSLERAKQYQQVIDDFPRLARELRQQLASMTSDSSKTVRNNMSSTELDQEILQVSSQL
LEEGRQAQQEQDRAREISDSLSQLPQQQTEARRAMTESDRRVQGASTATTPQEQAQIYAR
QAENAANKARVDELELAQLSANNRQELARMRAEVHQRQATQLDNYLQALRNQLNNQRQRE
AEQALERTEQLAENSGDLPSAISEQFRVNRELSADLNQQAQRMDLVASQQRLATNQTLQV
RQALSTLREQSQWLGASNLLGEALRAQVARLPDMPKSQQIDNEMAQLRVQRLRYEDLLER
QQELRKEKQDDGTPFTSEQSRILEAQLKTQRELLNSLISGCDTLILEITKLKVSNTQLQD
ALTEVRDATHRYLFWTADVSTVDLSFPMDTAQALARLLSLDTLGQLGKALAMMFTSKETV
LPILGAVLLVGFSISSRRHYHAFLARAASKVGKVTQDHFGLTLRTVFWSILVAVPIPVLW
AALGYGLQEAWPYPIAVAIGDGITATLPLLWAFMISASFARPNGLFVVHFRWPQARVARA
MRYYSLTVGLIVPLIMLLIAFANLEDREFSSTLGRLCFILICGALSIVTVSLKRAGIPLY
LDKEGNGDNFINRILWNLMIAIPLVAAFASCIGYLATAQALLARLETSVGIWFFLLVIYH
IVRRWMLIQRRRIAFDRARQRRADMLANRARSEEDKEQAAGSNEGVEADEPVIDLDAISA
QSLRLVRSILTLIALVSVIVLWSEIHSAFGFLENIRLWDVSTTVQGVESIQPITLGSILI
AVLVLIITTQLVRNMPALLELALLQHLSLTPGTGYAITTLTKYILMLIGGLIGFSMIGIE
WAKLQWLVAALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSITRINTRA
TTITDWDRKEIIVPNKAFITEQFVNWSLSDSVTRVVLTIPAPAGVNSDEVTLILKQAAER
CTYVLDMPAPDVFLVDLQQGIQLFELRVYAAEMGHRMPLRHELHQLILHGFAEHGIEMPF
PPFQVRMETVGKKSPASNGAPAARNYKSGGL
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgcctttctgatcctgctgctgagcctgtggctcagcagccctgttttcgcggcc
accgtgccacaagccagtgacctgaaacaggagctggacgccgtcaaatctgcgaaaagc
tcccctgcccaaactgagcaaatccagacgctggaaacggcactgaatttcctcgctgaa
cgtgatgattcgctggaacgggcaaagcagtatcagcaggtgattgacgacttcccacgt
ctggcgcgcgagctacgccagcaactcgccagcatgaccagtgatagcagcaaaacggtg
cgcaataatatgagcagcaccgagctggatcaggaaattttgcaggtcagcagtcagctg
ctggaagaggggcgtcaggcacagcaggaacaagatcgggcgcgtgagatcagcgattcg
ctgtcacagttaccgcagcaacaaaccgaagcgcgccgggccatgacggagagcgatcgt
cgggtacagggcgcgtcaaccgctactacgccccaggaacaggcgcagatttacgcacgt
caggcggaaaacgccgccaacaaagcgcgcgttgatgaactggaactggcgcagctgtcc
gccaataaccgccaggaattggcacggatgcgtgccgaggtgcatcagcgccaggccacg
caactggacaattatctgcaagcgctgcgcaatcaactgaataatcagcgccagcgtgaa
gctgaacaagctctggaacgtaccgagcaactggcggaaaacagcggcgatctgcccagc
gccattagcgaacaattccgcgtcaaccgtgaattgtctgctgaccttaaccagcaagca
caacgcatggatttggtcgcttcacagcaacgcctggccaccaatcaaactttacaggtc
cgtcaggcgctgagcaccctgcgcgagcaatcgcagtggctcggtgcatcgaatctgctg
ggtgaagcgctacgcgcccaagtggctcgtttgcctgatatgcctaaatcgcagcagatt
gataacgaaatggctcagctgcgcgtccaacggctgcgttatgaggatttacttgagcgt
cagcaggaattgcgcaaagagaaacaggatgatggcacgccgttcaccagtgaacagagc
cgcattctggaagcccagttgaaaacccagcgcgagctgctcaactcattaatttccggc
tgcgatacgctgattctggaaattaccaaacttaaagtttccaacacccagttgcaggat
gcacttacggaagtgcgcgatgccacccatcgttatctgttctggaccgctgatgtcagt
acggttgacctgagtttcccgatggataccgcacaggcgctggcgcgtctgctgtcgctc
gacacactgggtcagttgggcaaagccctggcgatgatgtttaccagtaaagaaacagtg
ttaccgattttgggtgccgtgttgctggttggcttcagcatcagttcacgccgtcactac
catgcgtttctcgcccgggctgccagcaaggtcggcaaggtgacacaggatcacttcggt
ctgacgctgcgcacggtgttctggtcgattctggtggctgtaccgattccggtgttatgg
gccgccctcggctacggtttgcaggaagcctggccctacccgattgccgtggcgattggc
gatggtattaccgccacgctgccgctgctgtgggcgtttatgatcagcgcctcctttgcc
cgtccgaatggcctgtttgtggtgcacttccgttggccccaggcacgcgtggcgcgtgca
atgcgttattactcgctgaccgttggcctgattgtaccgctgatcatgctgctcatcgct
ttcgctaacctggaagaccgtgagttctcatcaacgctcggcaggttgtgtttcatcctg
atttgcggggcactgagcatcgtgacggtcagcctgaaacgcgccggtattccgctgtat
ctggataaagaaggcaacggtgataattttatcaaccgtattctgtggaacctgatgatc
gccattcccctggtcgcggcgttcgcatcctgcatcggctatctggcaacagcgcaggcg
ttgctggcgcgtctggaaacctcggtcgggatctggttcttcctgctggtgatttaccat
attgttcggcgctggatgctaatccaacgtcggcgtattgcctttgatcgcgcccgtcag
cgccgtgccgatatgctggccaaccgcgcgcgcagtgaagaagacaaagaacaagccgcc
ggcagcaacgaaggggtggaagcagatgaaccggtcatcgatcttgacgctatcagcgcc
cagtcattgcggctggtacgttcgatactgacgctgatcgccctggtgtcagtgattgtg
ctgtggtcagagatacactcggcgtttggtttcctcgaaaatattcgtctgtgggatgtc
agtaccacggtacagggggtggagagcattcagccgattaccctcggatcgattctgatc
gccgttctggtattgattattaccacccaactggtgcggaacatgcctgcgctcctcgag
ctggcgctgttgcagcacctgagtctgacgcctggcaccggttatgccatcaccacgctg
accaaatatatcctgatgctgattggcggactgattggcttctcaatgattggcattgaa
tgggcgaagctgcaatggctggtcgccgcactcggtgtcggtttaggctttggcttacag
gagatttttgccaactttatttccggcctgattatcctgtttgaaaaaccgattcgtatc
ggcgataccgttaccatccgcgatctcaccggcagtatcacccgcatcaacacccgcgcg
accaccattaccgactgggatcgcaaagagattatcgtgccgaataaggcctttattacc
gagcaatttgttaactggtcgctgtctgattcggtaacgcgtgtggtattgaccattccg
gcaccggctggggtcaatagcgatgaagtcaccctgatcctgaaacaagcggctgagcgt
tgtacttatgtactggatatgcccgccccggatgtgttcctcgtcgatctgcaacaaggt
atccagctgtttgaactgcgtgtgtatgctgccgagatgggacaccgcatgccgctgcgt
catgaactgcatcagctgattttgcatggcttcgccgagcacggcatcgaaatgcctttc
ccgcccttccaggtacgtatggaaaccgtgggcaagaaaagcccggccagcaatggcgca
cctgcggcacgtaattataagtcgggtgggttataa
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