Pantoea sp. At-9b: Pat9b_3765
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Entry
Pat9b_3765 CDS
T01386
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pao
Pantoea sp. At-9b
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pao03016
]
Pat9b_3765
Enzymes [BR:
pao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Pat9b_3765
Transfer RNA biogenesis [BR:
pao03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Pat9b_3765
Prokaryotic type
Pat9b_3765
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
DBD_Tnp_Mut
Motif
Other DBs
NCBI-ProteinID:
ADU71055
LinkDB
All DBs
Position
complement(4104777..4105688)
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AA seq
303 aa
AA seq
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MQLTFLGTGAGAPSLQRNVTAIALTLSKRGDTWLFDCGEATQHQYMRSTLKPSKLEKIFI
THLHGDHIFGLPGLLTSRSMAGLKEPLTIYGPQGIRQFIDTALSLSGSYTSFPLEIVEIA
AGLVFDDGDFRVTAWPMNHIVECYGYRIEQHDKPGFLDAPRLKAEGVPRGPWYQQLKQGE
RVRLEDGREINGAEYLGPATKGKVVAIFGDTGPTEVALQLAADADVMVHETTLEAALAEK
ANSRGHSTTVQTAEVAKQARAKRLIATHFSSRYLSQDRERLLAECQSIFAATELAHDFAV
FEI
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgacatttctcggcaccggcgcaggcgcgccaagcctgcaacgtaacgtcacc
gccattgcgttgaccttatccaaacggggtgacacctggttgttcgattgtggtgaggcg
acgcagcatcaatatatgcgttcgacgctgaaaccgagcaagctggaaaaaatctttatt
acccatctgcacggcgaccatatttttggcctgcccgggttgcttaccagccgttcgatg
gcgggtttaaaagagccgctgaccatttatggcccacaaggtatccgccagtttatcgac
acggcgctgagcctgagcggctcctataccagctttccgctggaaatcgtggaaatcgcc
gccggtctggtgtttgacgacggtgatttccgcgtcaccgcctggccgatgaaccatatt
gttgagtgttacggctaccgcatcgaacagcatgacaagcctggcttccttgatgcgccg
cgcctgaaagccgaaggcgtgccgcgcgggccgtggtatcagcaactgaaacagggtgaa
cgtgttcggctggaggatgggcgcgagattaacggcgcggagtatctggggccagccacc
aaaggaaaggtggtggcgatttttggcgataccgggccgaccgaggtggcattacaactg
gcggccgatgctgatgtgatggtgcacgaaaccacgctggaggcggcactggcagaaaaa
gccaatagtcgtgggcattcaacgacggtacaaacggcagaggtggcaaaacaggccagg
gctaagcggttgatcgcgacccatttcagctcgcgctatttgtctcaggatcgggaaaga
ttactggcggagtgccagtccatctttgcggcgacggaactggcacatgatttcgcggtg
ttcgagatttag
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